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Carg27549 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27549
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:7976065..7977261
RNA-Seq ExpressionCarg27549
SyntenyCarg27549
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037251.1 hypothetical protein SDJN02_00874, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-48100Show/hide
Query:  MKVGVGDEAPVLDRKKKRFTKQGLQFIQPNGCNNVVIAQLLIQPNGCNNVVIAQLLSFVVLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
        MKVGVGDEAPVLDRKKKRFTKQGLQFIQPNGCNNVVIAQLLIQPNGCNNVVIAQLLSFVVLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
Subjt:  MKVGVGDEAPVLDRKKKRFTKQGLQFIQPNGCNNVVIAQLLIQPNGCNNVVIAQLLSFVVLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
XP_022926295.1 uncharacterized protein LOC111433475 [Cucurbita moschata]4.1e-1295.12Show/hide
Query:  VLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
        +L GMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
Subjt:  VLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
TrEMBL top hitse value%identityAlignment
A0A6J1EKP8 uncharacterized protein LOC1114334752.0e-1295.12Show/hide
Query:  VLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
        +L GMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
Subjt:  VLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTGGGGTTGGTGATGAAGCCCCTGTTTTGGATAGGAAGAAGAAAAGGTTTACAAAACAAGGCCTTCAGTTCATTCAACCTAATGGTTGCAATAATGTTGTGAT
TGCTCAATTACTCATTCAACCTAATGGTTGCAATAATGTTGTGATTGCCCAATTACTCTCTTTCGTAGTTTTAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCA
AGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTCCCCGGGGATGATTGCCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTGGGGTTGGTGATGAAGCCCCTGTTTTGGATAGGAAGAAGAAAAGGTTTACAAAACAAGGCCTTCAGTTCATTCAACCTAATGGTTGCAATAATGTTGTGAT
TGCTCAATTACTCATTCAACCTAATGGTTGCAATAATGTTGTGATTGCCCAATTACTCTCTTTCGTAGTTTTAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCTCA
AGATGAAACATGTGGAATTTGTAGGATGGCTTTTGATGGTTGTTGCCCTGATTGCAAACTCCCCGGGGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCC
ATCTTCATTGCATCCTTAAATGGGTGAATGCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGAGAGCACAATTGTATTACTTTA
TTTACGTTACA
Protein sequenceShow/hide protein sequence
MKVGVGDEAPVLDRKKKRFTKQGLQFIQPNGCNNVVIAQLLIQPNGCNNVVIAQLLSFVVLGGMLLHHGLGMLKMKHVEFVGWLLMVVALIANSPGMIAH