; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27558 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27558
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr12:6979289..6985430
RNA-Seq ExpressionCarg27558
SyntenyCarg27558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020801.1 hypothetical protein SDJN02_17489, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-187100Show/hide
Query:  MGSPVSLHIVGPPYLSSEHTLGRYLGRTPVRTSNRHDSAMQSITIVVLPLDGRNQVQEGRNGAKQVGNRFPEPNKLLELRSRRRADQVARAEGVSRCRRA
        MGSPVSLHIVGPPYLSSEHTLGRYLGRTPVRTSNRHDSAMQSITIVVLPLDGRNQVQEGRNGAKQVGNRFPEPNKLLELRSRRRADQVARAEGVSRCRRA
Subjt:  MGSPVSLHIVGPPYLSSEHTLGRYLGRTPVRTSNRHDSAMQSITIVVLPLDGRNQVQEGRNGAKQVGNRFPEPNKLLELRSRRRADQVARAEGVSRCRRA

Query:  TWHNQRATRVQRSRVEARVVGLSARAVGRVGFWTRVVVAVGWAGLYRWAAFCFDGPRVYSLRRAGFGSRVRGRVELRLLHSISSEFFGDALSLSSITAFR
        TWHNQRATRVQRSRVEARVVGLSARAVGRVGFWTRVVVAVGWAGLYRWAAFCFDGPRVYSLRRAGFGSRVRGRVELRLLHSISSEFFGDALSLSSITAFR
Subjt:  TWHNQRATRVQRSRVEARVVGLSARAVGRVGFWTRVVVAVGWAGLYRWAAFCFDGPRVYSLRRAGFGSRVRGRVELRLLHSISSEFFGDALSLSSITAFR

Query:  RPFFLLLPLFLSLLLPLISLMESSKSTPGVCKSLWDYFRCVSWRWLKVRFGFRGGPGVGRSLWVVCERKLQRLSEFSVLPANASKEGNNSNLRFYPSEQS
        RPFFLLLPLFLSLLLPLISLMESSKSTPGVCKSLWDYFRCVSWRWLKVRFGFRGGPGVGRSLWVVCERKLQRLSEFSVLPANASKEGNNSNLRFYPSEQS
Subjt:  RPFFLLLPLFLSLLLPLISLMESSKSTPGVCKSLWDYFRCVSWRWLKVRFGFRGGPGVGRSLWVVCERKLQRLSEFSVLPANASKEGNNSNLRFYPSEQS

Query:  RLSLSQTLKKEGVELLGREINPPPLFPAEEEGPEII
        RLSLSQTLKKEGVELLGREINPPPLFPAEEEGPEII
Subjt:  RLSLSQTLKKEGVELLGREINPPPLFPAEEEGPEII
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCACCAGTCAGTTTGCACATCGTTGGGCCACCTTACTTATCGAGCGAGCATACATTGGGACGCTACCTAGGTCGGACACCCGTTAGAACTAGTAACCGTCACGA
CAGTGCTATGCAAAGCATAACGATCGTTGTCCTGCCATTGGATGGTCGAAATCAAGTCCAGGAGGGTCGGAATGGTGCCAAACAGGTCGGAAACAGGTTTCCCGAGCCGA
ATAAGCTGCTAGAGCTGAGAAGCCGCCGCCGAGCAGATCAAGTCGCTAGAGCCGAGGGGGTGTCGCGCTGCAGACGTGCCACGTGGCACAACCAGAGGGCGACGCGTGTG
CAGCGGTCTCGAGTCGAGGCTCGGGTCGTAGGGTTAAGTGCGCGGGCTGTCGGACGGGTCGGATTCTGGACACGAGTTGTGGTTGCGGTGGGTTGGGCTGGACTCTACCG
TTGGGCCGCATTTTGTTTCGACGGGCCGAGAGTTTATTCGTTGCGTCGGGCAGGTTTTGGGTCGCGGGTCAGAGGTCGGGTCGAACTTCGTCTTCTGCACTCGATTTCCA
GCGAATTTTTCGGCGACGCTCTCTCTCTCTCTTCGATCACGGCATTTCGACGTCCTTTTTTCCTCCTCCTTCCTCTGTTTCTGAGTCTCCTTCTCCCCCTAATTTCGCTT
ATGGAATCGTCTAAATCTACCCCTGGTGTGTGTAAAAGTCTCTGGGATTATTTTCGTTGCGTGTCTTGGAGGTGGCTGAAGGTTAGGTTTGGTTTCCGTGGTGGCCCCGG
CGTCGGGCGCTCTTTGTGGGTCGTGTGCGAACGAAAACTCCAGCGTTTATCGGAGTTTTCAGTCCTGCCAGCGAATGCTTCTAAGGAAGGTAATAATAGTAATTTACGAT
TTTACCCCTCAGAACAATCCCGTCTCTCGCTTTCTCAGACGTTGAAAAAGGAAGGTGTTGAGTTGTTGGGCAGAGAGATTAATCCTCCCCCTTTGTTTCCGGCGGAGGAG
GAGGGGCCGGAGATAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCACCAGTCAGTTTGCACATCGTTGGGCCACCTTACTTATCGAGCGAGCATACATTGGGACGCTACCTAGGTCGGACACCCGTTAGAACTAGTAACCGTCACGA
CAGTGCTATGCAAAGCATAACGATCGTTGTCCTGCCATTGGATGGTCGAAATCAAGTCCAGGAGGGTCGGAATGGTGCCAAACAGGTCGGAAACAGGTTTCCCGAGCCGA
ATAAGCTGCTAGAGCTGAGAAGCCGCCGCCGAGCAGATCAAGTCGCTAGAGCCGAGGGGGTGTCGCGCTGCAGACGTGCCACGTGGCACAACCAGAGGGCGACGCGTGTG
CAGCGGTCTCGAGTCGAGGCTCGGGTCGTAGGGTTAAGTGCGCGGGCTGTCGGACGGGTCGGATTCTGGACACGAGTTGTGGTTGCGGTGGGTTGGGCTGGACTCTACCG
TTGGGCCGCATTTTGTTTCGACGGGCCGAGAGTTTATTCGTTGCGTCGGGCAGGTTTTGGGTCGCGGGTCAGAGGTCGGGTCGAACTTCGTCTTCTGCACTCGATTTCCA
GCGAATTTTTCGGCGACGCTCTCTCTCTCTCTTCGATCACGGCATTTCGACGTCCTTTTTTCCTCCTCCTTCCTCTGTTTCTGAGTCTCCTTCTCCCCCTAATTTCGCTT
ATGGAATCGTCTAAATCTACCCCTGGTGTGTGTAAAAGTCTCTGGGATTATTTTCGTTGCGTGTCTTGGAGGTGGCTGAAGGTTAGGTTTGGTTTCCGTGGTGGCCCCGG
CGTCGGGCGCTCTTTGTGGGTCGTGTGCGAACGAAAACTCCAGCGTTTATCGGAGTTTTCAGTCCTGCCAGCGAATGCTTCTAAGGAAGGTAATAATAGTAATTTACGAT
TTTACCCCTCAGAACAATCCCGTCTCTCGCTTTCTCAGACGTTGAAAAAGGAAGGTGTTGAGTTGTTGGGCAGAGAGATTAATCCTCCCCCTTTGTTTCCGGCGGAGGAG
GAGGGGCCGGAGATAATCTAG
Protein sequenceShow/hide protein sequence
MGSPVSLHIVGPPYLSSEHTLGRYLGRTPVRTSNRHDSAMQSITIVVLPLDGRNQVQEGRNGAKQVGNRFPEPNKLLELRSRRRADQVARAEGVSRCRRATWHNQRATRV
QRSRVEARVVGLSARAVGRVGFWTRVVVAVGWAGLYRWAAFCFDGPRVYSLRRAGFGSRVRGRVELRLLHSISSEFFGDALSLSSITAFRRPFFLLLPLFLSLLLPLISL
MESSKSTPGVCKSLWDYFRCVSWRWLKVRFGFRGGPGVGRSLWVVCERKLQRLSEFSVLPANASKEGNNSNLRFYPSEQSRLSLSQTLKKEGVELLGREINPPPLFPAEE
EGPEII