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Carg27566 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27566
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin-responsive protein
Genome locationCarg_Chr12:8149468..8149962
RNA-Seq ExpressionCarg27566
SyntenyCarg27566
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7299.3Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC
        MN FHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC

Query:  GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
        GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

KAG7020902.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-78100Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC
        MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC

Query:  GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWKSKKWDF
        GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWKSKKWDF
Subjt:  GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWKSKKWDF

XP_022938283.1 auxin-responsive protein IAA33 [Cucurbita moschata]2.8e-6592.41Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRM---EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
        MN FHSHTQSP    AAAAEYFKMRRWPETQLG PPLQQQQQ+M   EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRM---EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD

Query:  GGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
        GGCGGGGGGEPS DRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]8.1e-6593.71Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLG-PPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG
        MN FHSHTQSP  AAAAAAEYFKMRRWPETQLG PPPLQQQQQ+M   EEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLG-PPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG

Query:  CGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
        CG GGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  CGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]3.8e-6292.25Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC
        MN FHSHTQSP AAAAAAAEYFKMRRWPETQLGPPPLQQQQ   EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD   
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGC

Query:  GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
          GGGGEPSG+RQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

TrEMBL top hitse value%identityAlignment
A0A1S3BRI6 Auxin-responsive protein2.1e-4272.59Show/hide
Query:  TQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE
        TQSP  AAAAAAEYFKM RW E ++GPP           ++ EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD        GE
Subjt:  TQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE

Query:  PSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
         SG+R+LDL NAVPG++VAYEDIENDLLLAGDLNW
Subjt:  PSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

A0A5A7UPU6 Auxin-responsive protein5.5e-4372.79Show/hide
Query:  TQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE
        TQSP  AAAAAAEYFKM RW E ++GPP           ++ EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD        GE
Subjt:  TQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE

Query:  PSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK
         SG+R+LDL NAVPG++VAYEDIENDLLLAGDLNWK
Subjt:  PSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK

A0A5D3BTE4 Auxin-responsive protein2.5e-4373.53Show/hide
Query:  TQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE
        TQSP  AAAAAAEYFKM RW E ++GPP           ++ EEDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD        GE
Subjt:  TQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE

Query:  PSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK
         SG+R+LDL NAVPG++VAYEDIENDLLLAGDLNWK
Subjt:  PSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK

A0A6J1FIF6 Auxin-responsive protein1.4e-6592.41Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRM---EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
        MN FHSHTQSP    AAAAEYFKMRRWPETQLG PPLQQQQQ+M   EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRM---EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD

Query:  GGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
        GGCGGGGGGEPS DRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

A0A6J1I3D9 Auxin-responsive protein3.9e-6593.71Show/hide
Query:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLG-PPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG
        MN FHSHTQSP  AAAAAAEYFKMRRWPETQLG PPPLQQQQQ+M   EEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG
Subjt:  MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLG-PPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG

Query:  CGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
        CG GGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  CGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

SwissProt top hitse value%identityAlignment
Q69VE0 Auxin-responsive protein IAA232.9e-0429.29Show/hide
Query:  SHTQSPAAAAAAAAEYFKMR-RWPETQ-LGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGG
        S T  P    AA A++   +   P+ + +G PP++  ++    E+     +A    V V ++G    +++ L  HA Y  L +AL  MF         GG
Subjt:  SHTQSPAAAAAAAAEYFKMR-RWPETQ-LGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGG

Query:  GGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK
        GGG+  G + +DL      ++  YED + D +L GD+ WK
Subjt:  GGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK

Q9FKM7 Auxin-responsive protein IAA334.5e-2663.16Show/hide
Query:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK
        E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD          G + + D  LDL+NA+PGHL+AYED+ENDLLLAGDL WK
Subjt:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK

Arabidopsis top hitse value%identityAlignment
AT5G57420.1 indole-3-acetic acid inducible 333.2e-2763.16Show/hide
Query:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK
        E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD          G + + D  LDL+NA+PGHL+AYED+ENDLLLAGDL WK
Subjt:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCT
GCAGCAGCAGCAGCAGCGGATGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCA
GCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCCCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCTGCGGCGGCGGTGGCGGTGGCGAACCCTCCGGT
GACCGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTCCTTGCCGGTGATCTCAATTGGAAGTCAAAAAAATG
GGATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGCCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCT
GCAGCAGCAGCAGCAGCGGATGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCA
GCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCCCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCTGCGGCGGCGGTGGCGGTGGCGAACCCTCCGGT
GACCGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTCCTTGCCGGTGATCTCAATTGGAAGTCAAAAAAATG
GGATTTTTAG
Protein sequenceShow/hide protein sequence
MNAFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSG
DRQLDLANAVPGHLVAYEDIENDLLLAGDLNWKSKKWDF