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Carg27572 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27572
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:7969015..7976388
RNA-Seq ExpressionCarg27572
SyntenyCarg27572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022404.1 hypothetical protein SDJN02_16135, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-229100Show/hide
Query:  MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVKSVHMKYE
        MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVKSVHMKYE
Subjt:  MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVKSVHMKYE

Query:  YSPSLVSIGHWTDNARRRMTPHENHVYSCMGERAEMSVSGRLPLKWVFEGQYQTARVCRYCALARVLEVATYTCYTSDHGTWKVFFILVKNLEKNLSQTL
        YSPSLVSIGHWTDNARRRMTPHENHVYSCMGERAEMSVSGRLPLKWVFEGQYQTARVCRYCALARVLEVATYTCYTSDHGTWKVFFILVKNLEKNLSQTL
Subjt:  YSPSLVSIGHWTDNARRRMTPHENHVYSCMGERAEMSVSGRLPLKWVFEGQYQTARVCRYCALARVLEVATYTCYTSDHGTWKVFFILVKNLEKNLSQTL

Query:  SSHIQNLSQVWSLIGFHNPVLRSEDSGEDIVVVRNRFVRQKEFELQKFNLGQLNKSGNRREAEEKDQGKNKNRTDGHRVKERTGRRVKERRKEPKTYYRL
        SSHIQNLSQVWSLIGFHNPVLRSEDSGEDIVVVRNRFVRQKEFELQKFNLGQLNKSGNRREAEEKDQGKNKNRTDGHRVKERTGRRVKERRKEPKTYYRL
Subjt:  SSHIQNLSQVWSLIGFHNPVLRSEDSGEDIVVVRNRFVRQKEFELQKFNLGQLNKSGNRREAEEKDQGKNKNRTDGHRVKERTGRRVKERRKEPKTYYRL

Query:  PRERVKEKRGEQSLPQSESLTLREQGVSRIQPSCLLSSLQESERKEKDQFQIVFPSGSVARPGKRGYAGEVAQVISVKLNEQYRIRKGRLRSERRISFIY
        PRERVKEKRGEQSLPQSESLTLREQGVSRIQPSCLLSSLQESERKEKDQFQIVFPSGSVARPGKRGYAGEVAQVISVKLNEQYRIRKGRLRSERRISFIY
Subjt:  PRERVKEKRGEQSLPQSESLTLREQGVSRIQPSCLLSSLQESERKEKDQFQIVFPSGSVARPGKRGYAGEVAQVISVKLNEQYRIRKGRLRSERRISFIY

Query:  STVKQLKRLH
        STVKQLKRLH
Subjt:  STVKQLKRLH

XP_023520559.1 uncharacterized protein LOC111783968 [Cucurbita pepo subsp. pepo]5.5e-5589.06Show/hide
Query:  MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVKSVHMKYE
        MTSKGASLKRRPSGHM AN EECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEV EGIWSCGSGVKSVHMKYE
Subjt:  MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVKSVHMKYE

Query:  YSPSLVSIGHWTDNARRRMTPHENHVYS
         SPSLVSIGHWTD          NHVYS
Subjt:  YSPSLVSIGHWTDNARRRMTPHENHVYS

XP_023520948.1 phosphate transporter PHO1 homolog 3-like [Cucurbita pepo subsp. pepo]5.2e-1389.36Show/hide
Query:  MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDML
        MTSKGASLKRRPSGHMRAN EECHDAIEEDDASSNTPPRKV   D+L
Subjt:  MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDML

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGCAAAGGGGCGTCCCTCAAGAGACGCCCATCCGGCCATATGCGGGCCAACGCAGAAGAATGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACC
ACCACGCAAAGTGGGCATTGAAGACATGTTGAGACACAAGCATAACAGAGACATCAGCATAGACATGAAGGACAAGATAGGCTTGTTGAAGGGTCGGGTAGGGCCCCGGG
CCTTAACCTCAAAAGTTGAGGTTTCGGAAGGAATTTGGTCATGCGGTTCGGGAGTTAAGTCCGTCCATATGAAATATGAATACTCGCCAAGTTTGGTGTCAATCGGACAT
TGGACGGACAATGCACGACGCCGTATGACACCTCACGAAAATCATGTCTACTCCTGTATGGGCGAGCGTGCTGAGATGAGTGTCTCGGGGCGACTTCCTTTGAAATGGGT
TTTTGAAGGACAGTACCAGACGGCACGGGTGTGCCGGTATTGCGCCCTAGCTCGTGTGTTGGAGGTTGCTACATACACCTGCTATACGAGTGATCATGGTACATGGAAGG
TTTTCTTCATCTTGGTGAAAAACCTTGAGAAAAACCTCTCACAAACACTCTCTTCACATATACAAAATCTCTCCCAAGTTTGGTCACTTATCGGATTCCACAATCCCGTT
CTAAGGTCGGAGGATAGTGGAGAAGACATTGTGGTGGTTCGAAATCGGTTCGTGAGGCAAAAGGAGTTTGAACTACAAAAGTTCAATCTAGGTCAGCTTAATAAATCAGG
TAATAGGCGCGAAGCCGAGGAGAAAGATCAGGGAAAGAACAAGAACAGAACAGATGGTCATAGAGTCAAAGAAAGGACAGGCAGGAGAGTGAAAGAAAGGAGGAAAGAAC
CAAAGACCTATTACCGATTACCGAGGGAAAGAGTGAAAGAAAAGAGAGGTGAACAATCACTTCCTCAGTCAGAATCACTCACACTAAGAGAACAAGGGGTTAGTCGAATT
CAGCCTTCTTGCTTGCTTTCGTCTTTACAGGAGAGTGAGAGAAAGGAGAAAGATCAGTTCCAAATAGTCTTTCCTTCCGGTTCAGTAGCCCGCCCAGGGAAGAGAGGTTA
CGCCGGTGAAGTAGCCCAGGTCATATCGGTGAAGCTGAATGAGCAGTATAGGATAAGAAAGGGTAGGTTACGGAGTGAAAGAAGGATTTCATTCATTTACTCGACTGTAA
AGCAGCTAAAGCGTCTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGCAAAGGGGCGTCCCTCAAGAGACGCCCATCCGGCCATATGCGGGCCAACGCAGAAGAATGCCATGATGCGATCGAGGAGGACGATGCATCATCCAACACACC
ACCACGCAAAGTGGGCATTGAAGACATGTTGAGACACAAGCATAACAGAGACATCAGCATAGACATGAAGGACAAGATAGGCTTGTTGAAGGGTCGGGTAGGGCCCCGGG
CCTTAACCTCAAAAGTTGAGGTTTCGGAAGGAATTTGGTCATGCGGTTCGGGAGTTAAGTCCGTCCATATGAAATATGAATACTCGCCAAGTTTGGTGTCAATCGGACAT
TGGACGGACAATGCACGACGCCGTATGACACCTCACGAAAATCATGTCTACTCCTGTATGGGCGAGCGTGCTGAGATGAGTGTCTCGGGGCGACTTCCTTTGAAATGGGT
TTTTGAAGGACAGTACCAGACGGCACGGGTGTGCCGGTATTGCGCCCTAGCTCGTGTGTTGGAGGTTGCTACATACACCTGCTATACGAGTGATCATGGTACATGGAAGG
TTTTCTTCATCTTGGTGAAAAACCTTGAGAAAAACCTCTCACAAACACTCTCTTCACATATACAAAATCTCTCCCAAGTTTGGTCACTTATCGGATTCCACAATCCCGTT
CTAAGGTCGGAGGATAGTGGAGAAGACATTGTGGTGGTTCGAAATCGGTTCGTGAGGCAAAAGGAGTTTGAACTACAAAAGTTCAATCTAGGTCAGCTTAATAAATCAGG
TAATAGGCGCGAAGCCGAGGAGAAAGATCAGGGAAAGAACAAGAACAGAACAGATGGTCATAGAGTCAAAGAAAGGACAGGCAGGAGAGTGAAAGAAAGGAGGAAAGAAC
CAAAGACCTATTACCGATTACCGAGGGAAAGAGTGAAAGAAAAGAGAGGTGAACAATCACTTCCTCAGTCAGAATCACTCACACTAAGAGAACAAGGGGTTAGTCGAATT
CAGCCTTCTTGCTTGCTTTCGTCTTTACAGGAGAGTGAGAGAAAGGAGAAAGATCAGTTCCAAATAGTCTTTCCTTCCGGTTCAGTAGCCCGCCCAGGGAAGAGAGGTTA
CGCCGGTGAAGTAGCCCAGGTCATATCGGTGAAGCTGAATGAGCAGTATAGGATAAGAAAGGGTAGGTTACGGAGTGAAAGAAGGATTTCATTCATTTACTCGACTGTAA
AGCAGCTAAAGCGTCTTCATTGA
Protein sequenceShow/hide protein sequence
MTSKGASLKRRPSGHMRANAEECHDAIEEDDASSNTPPRKVGIEDMLRHKHNRDISIDMKDKIGLLKGRVGPRALTSKVEVSEGIWSCGSGVKSVHMKYEYSPSLVSIGH
WTDNARRRMTPHENHVYSCMGERAEMSVSGRLPLKWVFEGQYQTARVCRYCALARVLEVATYTCYTSDHGTWKVFFILVKNLEKNLSQTLSSHIQNLSQVWSLIGFHNPV
LRSEDSGEDIVVVRNRFVRQKEFELQKFNLGQLNKSGNRREAEEKDQGKNKNRTDGHRVKERTGRRVKERRKEPKTYYRLPRERVKEKRGEQSLPQSESLTLREQGVSRI
QPSCLLSSLQESERKEKDQFQIVFPSGSVARPGKRGYAGEVAQVISVKLNEQYRIRKGRLRSERRISFIYSTVKQLKRLH