CuGenDBv2

Gene ID	Carg27619
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AUGMIN subunit 2-like
Genome location	Carg_Chr20:1146396..1150044
RNA-Seq Expression	Carg27619
Synteny	Carg27619
Gene Ontology terms	GO:0007020 - microtubule nucleation (biological process) GO:0031023 - microtubule organizing center organization (biological process) GO:0051225 - spindle assembly (biological process) GO:1990498 - mitotic spindle microtubule (cellular component)
InterPro domains	IPR028346 - HAUS augmin-like complex subunit 2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6570545.1 AUGMIN subunit 2, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-105

91.89

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        DLQNISSATGEQGDDVIRVLRELAA                DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP PRPIDPSLRVVVDS+CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPWQSELSFDELAIRSLHRQEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

KAG7010403.1 AUGMIN subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-135

100

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Query:  MSNGKMIPTGLEETLRRIGECRMPFLNCCRSRFLCLSAFTDLQNISSATGEQGDDVIRVLRELAADEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNK
        MSNGKMIPTGLEETLRRIGECRMPFLNCCRSRFLCLSAFTDLQNISSATGEQGDDVIRVLRELAADEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNK
Subjt:  MSNGKMIPTGLEETLRRIGECRMPFLNCCRSRFLCLSAFTDLQNISSATGEQGDDVIRVLRELAADEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNK

Query:  DRIIARLQQPYSVDCIPVESEFQKQFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPN
        DRIIARLQQPYSVDCIPVESEFQKQFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPN
Subjt:  DRIIARLQQPYSVDCIPVESEFQKQFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPN

Query:  PSLPMPRPIDPSLRVVVDSSCITPPPWQSELSFDELAIRSLHRQEN
        PSLPMPRPIDPSLRVVVDSSCITPPPWQSELSFDELAIRSLHRQEN
Subjt:  PSLPMPRPIDPSLRVVVDSSCITPPPWQSELSFDELAIRSLHRQEN

XP_022943387.1 AUGMIN subunit 2-like isoform X1 [Cucurbita moschata]

1.4e-106

92.79

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        DLQNISSATGEQGDDVIRVLRELAA                DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPWQSELSFDELAIRSLHRQEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

XP_022986019.1 AUGMIN subunit 2-like [Cucurbita maxima]

3.7e-99

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        DLQNIS+ATGEQGDD+IRVLRELAA                +EKNV HLTHVSEMQKKIETLSRITTILKGVIQNKDRII RLQQPYSVDCIPVE+EFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFSVLL KAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVA ASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP PRPIDPSLRVVVDS+CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELS-FDELAIRSLHRQEN
        PPWQSE S FDELAI+SLHRQEN
Subjt:  PPWQSELS-FDELAIRSLHRQEN

XP_023512230.1 AUGMIN subunit 2-like isoform X1 [Cucurbita pepo subsp. pepo]

2.1e-102

89.64

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        DLQNISS TGEQGDDVIRVLRELAA                DEKNVAHLT+VSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNL VGNPNPSLP PRPIDPSLRVVVDS+CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPWQS+ SFDELAIRSLHRQEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGX9 Uncharacterized protein

4.8e-92

80.18

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        +LQNISSA GE+GDD+IRVLREL A                D+KNVAHLTHVSEM+KKIETLSRITTILK VIQNKDRIIARLQQPYS+DCIPVE+E+QK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFS LLMKAASDYGALTASVAD QWSQNF+ESPSVWGEMLRPIPVA ASCT FFEAMSAMRESFATLQNLRVGNPNPSLP   PIDPSLRV  +S CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPW+S+ SFD+LAIR+LHRQEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

A0A5A7UJJ7 AUGMIN subunit 2

1.1e-91

79.73

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        +LQNISSA GE+GDD+IRVLREL A                D+KNVAHLTHVSEM+KKIETLSRIT ILK VIQNKDRIIARLQQPYS+DCIPVE+E+QK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFS LLMKAASDYGALTASVAD QWSQNF+ESPSVWGEMLRPIPVA ASCT FFEAMSAMRESFATLQNLRVGNPNPSLP   P+DPSLRV  +S CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPW+SE SFD+LAIR+LHRQEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

A0A6J1FSW6 AUGMIN subunit 2-like isoform X1

6.9e-107

92.79

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        DLQNISSATGEQGDDVIRVLRELAA                DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPWQSELSFDELAIRSLHRQEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

A0A6J1I6N9 AUGMIN subunit 2-like

6.2e-92

80.18

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        +LQNISSATGE+GDD+IRVLREL A                D+KNVAHLTHVSEM+KKIETLSRITTILK VIQNKDRIIARLQQPYS+DCIPVE+EFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFS LLMKAASDYGALTASVAD QWSQNF+ESPSVWGEMLRPIPVA ASCT FFEAMSAMRESFATLQNLRVGNPN SLP   P+DPS+RV  DS+CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELSFDELAIRSLHRQEN
        PPW+SE SFD+LAIRS+H QEN
Subjt:  PPWQSELSFDELAIRSLHRQEN

A0A6J1JEX3 AUGMIN subunit 2-like

1.8e-99

Show/hide

Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        DLQNIS+ATGEQGDD+IRVLRELAA                +EKNV HLTHVSEMQKKIETLSRITTILKGVIQNKDRII RLQQPYSVDCIPVE+EFQK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP
        QFSVLL KAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVA ASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP PRPIDPSLRVVVDS+CITP
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSSCITP

Query:  PPWQSELS-FDELAIRSLHRQEN
        PPWQSE S FDELAI+SLHRQEN
Subjt:  PPWQSELS-FDELAIRSLHRQEN

SwissProt top hits

e value

%identity

Alignment

O48767 AUGMIN subunit 2

5.1e-75

68.61

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Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        +LQ+ +S+ GE+GDD+IRVLREL+                 D+KNVAHLTHV EMQKKIETLSRIT ILK VIQNKDRIIARLQQPYS+DCIPVE+E+QK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP-MPRPIDPSLRVVVDSSCIT
        QFS LLMKAASDYGALTASV+D QWSQNF+E PSVWGEMLRPIPVA ASCT FFEAMSAMRESFATLQ LRVGN   SLP  P   + + R   DS C+T
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP-MPRPIDPSLRVVVDSSCIT

Query:  PPPWQSELSFDELAIRSLHRQEN
        PP  + E SFD+LA+    RQ N
Subjt:  PPPWQSELSFDELAIRSLHRQEN

Arabidopsis top hits

e value

%identity

Alignment

AT2G32980.1 unknown protein

3.6e-76

68.61

Show/hide

Query:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK
        +LQ+ +S+ GE+GDD+IRVLREL+                 D+KNVAHLTHV EMQKKIETLSRIT ILK VIQNKDRIIARLQQPYS+DCIPVE+E+QK
Subjt:  DLQNISSATGEQGDDVIRVLRELAA----------------DEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQPYSVDCIPVESEFQK

Query:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP-MPRPIDPSLRVVVDSSCIT
        QFS LLMKAASDYGALTASV+D QWSQNF+E PSVWGEMLRPIPVA ASCT FFEAMSAMRESFATLQ LRVGN   SLP  P   + + R   DS C+T
Subjt:  QFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLP-MPRPIDPSLRVVVDSSCIT

Query:  PPPWQSELSFDELAIRSLHRQEN
        PP  + E SFD+LA+    RQ N
Subjt:  PPPWQSELSFDELAIRSLHRQEN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGAATGGGAAGATGATACCAACTGGGTTGGAAGAAACTCTGAGGCGAATCGGAGAATGTCGAATGCCCTTTCTCAATTGCTGCCGATCTCGGTTTCTCTGTCTCTC
TGCCTTCACAGACCTGCAAAATATATCTTCTGCTACTGGTGAGCAGGGTGATGATGTAATCAGAGTTTTACGAGAGCTTGCTGCTGATGAGAAAAATGTAGCTCATTTGA
CACATGTGAGTGAAATGCAAAAGAAGATCGAGACTTTATCAAGGATTACTACCATATTGAAAGGTGTCATCCAGAATAAGGATCGTATAATAGCTCGTCTTCAGCAACCG
TATTCAGTTGATTGCATTCCAGTGGAATCTGAATTTCAGAAACAATTTTCCGTGTTGTTGATGAAGGCTGCTAGTGATTATGGAGCTTTGACAGCTTCAGTTGCAGATCT
CCAATGGAGTCAGAACTTTAGGGAGTCGCCTTCAGTGTGGGGGGAAATGCTTAGGCCCATCCCTGTAGCTTCAGCTTCTTGCACTGGATTCTTTGAAGCCATGAGTGCTA
TGAGGGAGTCCTTTGCAACACTACAGAATCTCCGAGTAGGTAATCCGAATCCATCTTTGCCTATGCCCCGACCTATCGATCCATCCCTTCGTGTCGTAGTCGATTCAAGC
TGCATCACACCACCTCCATGGCAATCCGAATTGAGCTTTGATGAATTGGCCATCAGAAGCCTTCATAGGCAAGAAAATTGA

mRNA sequence

Show/hide mRNA sequence

ATTCAAATCAAACACCGGAAATGATTTCAAATCCGGAGTGTAATTCTCTGAGAATTAGGGTCTCCATGCTATAAAAATTCTGCAGTCTTAGCTGCTTTCTGCTATTTGCT
TTTCGAGCTTGCGCGGGGGGTTTTGAATGTCGAATGGGAAGATGATACCAACTGGGTTGGAAGAAACTCTGAGGCGAATCGGAGAATGTCGAATGCCCTTTCTCAATTGC
TGCCGATCTCGGTTTCTCTGTCTCTCTGCCTTCACAGACCTGCAAAATATATCTTCTGCTACTGGTGAGCAGGGTGATGATGTAATCAGAGTTTTACGAGAGCTTGCTGC
TGATGAGAAAAATGTAGCTCATTTGACACATGTGAGTGAAATGCAAAAGAAGATCGAGACTTTATCAAGGATTACTACCATATTGAAAGGTGTCATCCAGAATAAGGATC
GTATAATAGCTCGTCTTCAGCAACCGTATTCAGTTGATTGCATTCCAGTGGAATCTGAATTTCAGAAACAATTTTCCGTGTTGTTGATGAAGGCTGCTAGTGATTATGGA
GCTTTGACAGCTTCAGTTGCAGATCTCCAATGGAGTCAGAACTTTAGGGAGTCGCCTTCAGTGTGGGGGGAAATGCTTAGGCCCATCCCTGTAGCTTCAGCTTCTTGCAC
TGGATTCTTTGAAGCCATGAGTGCTATGAGGGAGTCCTTTGCAACACTACAGAATCTCCGAGTAGGTAATCCGAATCCATCTTTGCCTATGCCCCGACCTATCGATCCAT
CCCTTCGTGTCGTAGTCGATTCAAGCTGCATCACACCACCTCCATGGCAATCCGAATTGAGCTTTGATGAATTGGCCATCAGAAGCCTTCATAGGCAAGAAAATTGA

Protein sequence

Show/hide protein sequence

MSNGKMIPTGLEETLRRIGECRMPFLNCCRSRFLCLSAFTDLQNISSATGEQGDDVIRVLRELAADEKNVAHLTHVSEMQKKIETLSRITTILKGVIQNKDRIIARLQQP
YSVDCIPVESEFQKQFSVLLMKAASDYGALTASVADLQWSQNFRESPSVWGEMLRPIPVASASCTGFFEAMSAMRESFATLQNLRVGNPNPSLPMPRPIDPSLRVVVDSS
CITPPPWQSELSFDELAIRSLHRQEN

Carg27619 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome