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Carg27621 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27621
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSmall ubiquitin-related modifier
Genome locationCarg_Chr20:1156060..1159569
RNA-Seq ExpressionCarg27621
SyntenyCarg27621
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570548.1 Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia]7.9e-48100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

XP_004150752.1 small ubiquitin-related modifier 1 [Cucumis sativus]6.7e-4798.99Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

XP_008456407.1 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo]3.0e-47100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

XP_022943304.1 small ubiquitin-related modifier 1 [Cucurbita moschata]7.9e-48100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

XP_022986050.1 small ubiquitin-related modifier 1-like [Cucurbita maxima]3.9e-4799Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

TrEMBL top hitse value%identityAlignment
A0A1S3C3V0 Small ubiquitin-related modifier1.5e-47100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

A0A5A7UHK7 Small ubiquitin-related modifier1.5e-47100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

A0A6J1FTW7 Small ubiquitin-related modifier3.8e-48100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

A0A6J1JCZ0 Small ubiquitin-related modifier1.9e-4799Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        MSGVTNT QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

A0A6J1JFC9 Small ubiquitin-related modifier3.8e-48100Show/hide
Query:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
Subjt:  MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt31.2e-2255.91Show/hide
Query:  TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        T    ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Subjt:  TNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 14.7e-4390.53Show/hide
Query:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS G
Subjt:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

P55857 Small ubiquitin-related modifier 11.2e-3889.01Show/hide
Query:  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 39.5e-2055.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 22.6e-4194.44Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG +
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 13.3e-4490.53Show/hide
Query:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG
        +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS G
Subjt:  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG

AT5G55160.1 small ubiquitin-like modifier 21.8e-4294.44Show/hide
Query:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG +
Subjt:  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS

AT5G55160.2 small ubiquitin-like modifier 21.1e-3982.52Show/hide
Query:  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTG

Query:  GSS
        G +
Subjt:  GSS

AT5G55170.1 small ubiquitin-like modifier 36.7e-2155.06Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+   +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein5.7e-2052.27Show/hide
Query:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP+EL +ED DEI+A   Q GG S
Subjt:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGGATGGGAACGAGGTGTTCTTCAG
GATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTCGATGGTCGTCGTCTTCGAGCAG
AACAAACTCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACAGGTGGATCCAGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
TGATTCAATCTGCTTTCTTAGCTTCAGTCTTCTTGGATTCATAAGCAAGGAAATACTTATTTCCTCTTTTCAGGAGTCGGGGAAATCAGAAGGATTTGAACCCTAATTTC
TGGCAAATCGGCAGATTGAACAATGTCGGGGGTCACGAACACGCAGCAGGAGGAAGACAAAAAGCCCAACGATCAATCTGCGCATATCAATCTGAAGGTCAAAGGCCAGG
ATGGGAACGAGGTGTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTAATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTC
GATGGTCGTCGTCTTCGAGCAGAACAAACTCCCGACGAGCTAGAGATGGAGGATGGGGATGAGATTGATGCAATGTTGCACCAGACAGGTGGATCCAGTGGTTGATGAAG
TACGTGGGGTGTTGGATATGCTCCTTTAGTATTAGTATTTTATGTGTGTCATAATTATCTGCTTAAGCCGGCAGACTTCTAATCCCTGATGTCAATATTATTATTATTAT
CTTCTCGTATCACTTGTTACTTGGGTGGTTGTATGGATTGAAAGCTTCAGCAGGAAGCATTAGTAGCACATTTGGGAAGTTAATTACAATGTACCAACCTGTTTTTTTTT
CCTCCTTCACGTTGAAAATGGTAGACCATTTTAATTTCA
Protein sequenceShow/hide protein sequence
MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSSG