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Carg27638 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27638
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTransmembrane protein
Genome locationCarg_Chr09:12006738..12008022
RNA-Seq ExpressionCarg27638
SyntenyCarg27638
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592381.1 hypothetical protein SDJN03_14727, partial [Cucurbita argyrosperma subsp. sororia]2.9e-48100Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        LELGLRD
Subjt:  LELGLRD

XP_022925369.1 uncharacterized protein LOC111432678 [Cucurbita moschata]2.9e-48100Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        LELGLRD
Subjt:  LELGLRD

XP_022973995.1 uncharacterized protein LOC111472607 [Cucurbita maxima]1.9e-4798.13Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAE+GDGKAKKGDGWRSRSMGIKIVLICLGVVTV+AFSVILCKIWQRKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        LELGLRD
Subjt:  LELGLRD

XP_023535180.1 uncharacterized protein LOC111796683 [Cucurbita pepo subsp. pepo]3.2e-4798.13Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAE GDGKAKKGDGWRSRSMGIK+VLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        LELGLRD
Subjt:  LELGLRD

XP_038890666.1 uncharacterized protein LOC120080166 [Benincasa hispida]2.6e-3380.37Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MS SQSSRSLQFL F+F L LHSLSVLA++HSSA++G GK+KK D  RS SM IKI++ICLGVVTVIAFSVIL KIWQ+KKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        +ELGLRD
Subjt:  LELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ0 Uncharacterized protein1.6e-3178.7Show/hide
Query:  MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDEL
        MS SQSSRSLQFL F+FS +  HSLSVLA E+SSA++G GK KK D  RS SMGIKI++ICLGVVTVI FSVIL KIWQ+KKREEQHARLLKLFEDDDEL
Subjt:  MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDEL

Query:  ELELGLRD
        E+ELGLRD
Subjt:  ELELGLRD

A0A1S3CA76 uncharacterized protein LOC1034987103.2e-3279.63Show/hide
Query:  MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDEL
        MS SQSSRSLQFL FLF+ + LHSLSVLA+++SSA++G GK KK D  RS SMGIKI++ICLGVVTVIAFSVIL KIWQ+KKREEQHARLLKLFEDDDEL
Subjt:  MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDEL

Query:  ELELGLRD
        E+ELGLRD
Subjt:  ELELGLRD

A0A5A7TC90 Uncharacterized protein3.2e-3279.63Show/hide
Query:  MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDEL
        MS SQSSRSLQFL FLF+ + LHSLSVLA+++SSA++G GK KK D  RS SMGIKI++ICLGVVTVIAFSVIL KIWQ+KKREEQHARLLKLFEDDDEL
Subjt:  MSRSQSSRSLQFLSFLFS-LSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDEL

Query:  ELELGLRD
        E+ELGLRD
Subjt:  ELELGLRD

A0A6J1EBZ0 uncharacterized protein LOC1114326781.4e-48100Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        LELGLRD
Subjt:  LELGLRD

A0A6J1ICT0 uncharacterized protein LOC1114726079.1e-4898.13Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAE+GDGKAKKGDGWRSRSMGIKIVLICLGVVTV+AFSVILCKIWQRKKREEQHARLLKLFEDDDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        LELGLRD
Subjt:  LELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein5.0e-1442.06Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        M ++ ++  L +   LF  S+  L         ++N +   K      S   G K++L+ +G V V  FS  L K+WQ+KKR+EQ+ARLLKLFE+DDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        +ELGLRD
Subjt:  LELGLRD

AT1G57765.1 unknown protein3.2e-1343.93Show/hide
Query:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE
        +S S  + S   L    S+ LH    ++ + +S+  G   AK      S   G K++ I LG   V   S  L K+WQ+KKR+EQ+ARLLKLFE+DDELE
Subjt:  MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE

Query:  LELGLRD
        +ELGLRD
Subjt:  LELGLRD

AT1G57765.2 unknown protein4.2e-1346.88Show/hide
Query:  FLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD
        FL+ L+  S++   +  D +SS+      AK      S   G K++ I LG   V   S  L K+WQ+KKR+EQ+ARLLKLFE+DDELE+ELGLRD
Subjt:  FLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD

AT3G53490.1 unknown protein3.8e-0640.79Show/hide
Query:  SSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD
        S+ E+G  K ++  G     + + IV++ LGVV V    ++  K W++KKR+++ AR LKLFED D++E ELGL +
Subjt:  SSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTCCTTCCTTTTCTCTCTTTCTCTCCATTCTCTTTCAGTGTTGGCAGATGAGCATTCAAGTGCTGAAAATGG
TGATGGTAAAGCTAAAAAGGGCGATGGTTGGAGGAGCCGATCGATGGGGATCAAGATAGTACTCATATGTCTAGGAGTGGTAACTGTGATTGCCTTTTCTGTGATTCTAT
GCAAGATATGGCAAAGGAAGAAAAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAACTCGAACTCGGCCTTCGAGATTGA
mRNA sequenceShow/hide mRNA sequence
CGTTACCGCTGACCCAACTCCCTCCAATCCACATTTAGGAAAGAACTTGACGAAAAATCCGCCATTATCAACCTTTCCCGGTTTCCTTCTGAACCAATTCATTCTCCTCC
AAGACCTTGCAGAGATCGGGGAAGGGATGTCTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTCCTTCCTTTTCTCTCTTTCTCTCCATTCTCTTTCAGTGTTGGCA
GATGAGCATTCAAGTGCTGAAAATGGTGATGGTAAAGCTAAAAAGGGCGATGGTTGGAGGAGCCGATCGATGGGGATCAAGATAGTACTCATATGTCTAGGAGTGGTAAC
TGTGATTGCCTTTTCTGTGATTCTATGCAAGATATGGCAAAGGAAGAAAAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGATGATGATGAACTCGAACTCG
AACTCGGCCTTCGAGATTGAGCTCCACGATACTCATCCGTCCGTTCTCAATGTTCGACTAACTAAGAGGAGGTGCACATTGTTGATTCCTTTGCCTTTTGTTTAATGATG
TATACAAGCTTTTTGATCTTATCCTATTTTGTTTTTGGATGAGCTGAGCTCGTTAAATCATAGCAAATTTTTTCGTGTCAACTAGTTTTGAATAAGTTGTTTCTCCTTCA
ATCTTTCATGATATGTGAGGCATGTCTCAAATATCAGTCATTGTTTAGTGAATTGGTTCCATTGGTAAATACATGTTCAATTTTTCTATGGGCTGAGTAATTGTGATTCA
GAGTATATGCTGTTGAGCTAGCCATGTTCTGAAGAATGAGAAGATTTTCATTTTCAAAATGGATGTATAT
Protein sequenceShow/hide protein sequence
MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD