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Carg27649 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27649
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionD-cysteine desulfhydrase 2, mitochondrial isoform X2
Genome locationCarg_Chr18:7984819..7985735
RNA-Seq ExpressionCarg27649
SyntenyCarg27649
Gene Ontology termsGO:0008152 - metabolic process (biological process)
InterPro domainsIPR027278 - 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase
IPR036052 - Tryptophan synthase beta subunit-like PLP-dependent enzyme


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573678.1 D-cysteine desulfhydrase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]9.7e-6799.21Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

KAG7012766.1 D-cysteine desulfhydrase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-67100Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

XP_022944821.1 D-cysteine desulfhydrase 2, mitochondrial isoform X1 [Cucurbita moschata]1.3e-6698.43Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYP+GLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

XP_022944822.1 D-cysteine desulfhydrase 2, mitochondrial isoform X2 [Cucurbita moschata]1.3e-6698.43Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYP+GLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

XP_023541196.1 D-cysteine desulfhydrase 2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]3.1e-6597.67Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYP--VGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKAD
        MLADRIDGYKRQEKRLISEFKKHFGYP  VGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKAD
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYP--VGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKAD

Query:  VVMLHTGGTLGMFGIAQRYKSYFNNLKNV
        VVMLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  VVMLHTGGTLGMFGIAQRYKSYFNNLKNV

TrEMBL top hitse value%identityAlignment
A0A5A7SXQ8 D-cysteine desulfhydrase 22.4e-5584.25Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKAD-V
        MLADRIDGYKRQEKRLISEF+KHFG P+ L +DEVNGGIVNWVER R RKFGNVLDGEVE C+QIAQ+TGILVDPIYTLAAWEM TFLSQKGAK   D V
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKAD-V

Query:  VMLHTGGTLGMFGIAQRYKSYFNNLKN
        V+LHTGGTLG+FG+AQRYKSYFN+LKN
Subjt:  VMLHTGGTLGMFGIAQRYKSYFNNLKN

A0A6J1FZ47 D-cysteine desulfhydrase 2, mitochondrial isoform X16.1e-6798.43Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYP+GLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

A0A6J1FZ73 D-cysteine desulfhydrase 2, mitochondrial isoform X26.1e-6798.43Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYP+GLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

A0A6J1HST3 D-cysteine desulfhydrase 2, mitochondrial isoform X12.0e-6597.64Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVL GEVE CKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

A0A6J1HUH2 D-cysteine desulfhydrase 2, mitochondrial isoform X22.0e-6597.64Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVL GEVE CKQIAQETGILVDPIYTLAAWEM TFLSQKGAKVKADVV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKNV
        MLHTGGTLGMFGIAQRYKSYFNNLKNV
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKNV

SwissProt top hitse value%identityAlignment
A1L4V7 D-cysteine desulfhydrase 2, mitochondrial8.6e-3457.14Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLAD +  YKR E  LI+EF + F   V     ++N  ++ W++R  PRKFG VL+GEVE+C++IAQETG+LVDP+YTLAAWE  T L Q   +  + VV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKN
        MLHTGGTLGMFG+AQRYK+ F NLK+
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKN

B7NBR4 D-cysteine desulfhydrase9.3e-0435.14Show/hide
Query:  IVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWE-MTTFLSQKGAKVKADVVMLHTGGTLGMF
        I+ W + F P  +G   D  +E  K +A+  GIL+DP+YT  A   +   +SQK  K +  ++ +HTGG   +F
Subjt:  IVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWE-MTTFLSQKGAKVKADVVMLHTGGTLGMF

B9EYZ1 Putative D-cysteine desulfhydrase 2, mitochondrial1.1e-3354.4Show/hide
Query:  MLADRIDGYKRQEKRLISEFKK--HFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKAD
        MLAD ++ YK +EK LIS+FKK  H  Y   +GE+++   +V WVERF PR+FG VL+GE+ +C+QIAQ+TGIL+DP+YTLA WE    L    ++ K  
Subjt:  MLADRIDGYKRQEKRLISEFKK--HFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKAD

Query:  VVMLHTGGTLGMFGIAQRYKSYFNN
        VVM+HTGGTLG  G+AQRY S+F +
Subjt:  VVMLHTGGTLGMFGIAQRYKSYFNN

Q3Z2U3 D-cysteine desulfhydrase9.3e-0435.14Show/hide
Query:  IVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWE-MTTFLSQKGAKVKADVVMLHTGGTLGMF
        I+ W + F P  +G   D  +E  K +A+  GIL+DP+YT  A   +   +SQK  K +  ++ +HTGG   +F
Subjt:  IVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWE-MTTFLSQKGAKVKADVVMLHTGGTLGMF

Q9WY68 Putative 1-aminocyclopropane-1-carboxylate deaminase2.9e-0529.09Show/hide
Query:  DGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVVMLHTGG
        D +  + KR+IS  +++     GL    VN  +   V+ +R   +      +VEI K++A   GI++DP+YT  A+     + +   K   +V+ +HTGG
Subjt:  DGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVVMLHTGG

Query:  TLGMFGIAQR
          G+F  ++R
Subjt:  TLGMFGIAQR

Arabidopsis top hitse value%identityAlignment
AT3G26115.1 Pyridoxal-5'-phosphate-dependent enzyme family protein6.1e-3557.14Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV
        MLAD +  YKR E  LI+EF + F   V     ++N  ++ W++R  PRKFG VL+GEVE+C++IAQETG+LVDP+YTLAAWE  T L Q   +  + VV
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVV

Query:  MLHTGGTLGMFGIAQRYKSYFNNLKN
        MLHTGGTLGMFG+AQRYK+ F NLK+
Subjt:  MLHTGGTLGMFGIAQRYKSYFNNLKN

AT3G26115.2 Pyridoxal-5'-phosphate-dependent enzyme family protein1.3e-3253.79Show/hide
Query:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPR------KFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAK
        MLAD +  YKR E  LI+EF + F   V     ++N  ++ W++R  PR      +FG VL+GEVE+C++IAQETG+LVDP+YTLAAWE  T L Q   +
Subjt:  MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPR------KFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAK

Query:  VKADVVMLHTGGTLGMFGIAQRYKSYFNNLKN
          + VVMLHTGGTLGMFG+AQRYK+ F NLK+
Subjt:  VKADVVMLHTGGTLGMFGIAQRYKSYFNNLKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGCTGATAGAATTGATGGGTATAAGCGGCAGGAGAAGCGTTTGATTTCTGAATTCAAGAAGCATTTTGGCTATCCTGTTGGCCTAGGCGAGGATGAAGTAAATGG
CGGAATTGTAAATTGGGTAGAGCGTTTCCGTCCAAGAAAATTTGGCAATGTGCTGGATGGTGAAGTGGAGATATGCAAACAGATTGCTCAGGAAACCGGTATTCTTGTTG
ATCCTATTTACACTCTAGCTGCTTGGGAAATGACTACTTTTCTTTCTCAAAAGGGAGCCAAAGTGAAAGCAGATGTGGTGATGCTTCACACTGGTGGTACCCTAGGCATG
TTTGGAATAGCTCAAAGGTATAAATCTTACTTTAACAACCTCAAAAATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGCTGATAGAATTGATGGGTATAAGCGGCAGGAGAAGCGTTTGATTTCTGAATTCAAGAAGCATTTTGGCTATCCTGTTGGCCTAGGCGAGGATGAAGTAAATGG
CGGAATTGTAAATTGGGTAGAGCGTTTCCGTCCAAGAAAATTTGGCAATGTGCTGGATGGTGAAGTGGAGATATGCAAACAGATTGCTCAGGAAACCGGTATTCTTGTTG
ATCCTATTTACACTCTAGCTGCTTGGGAAATGACTACTTTTCTTTCTCAAAAGGGAGCCAAAGTGAAAGCAGATGTGGTGATGCTTCACACTGGTGGTACCCTAGGCATG
TTTGGAATAGCTCAAAGGTATAAATCTTACTTTAACAACCTCAAAAATGTTTAACAATTGTAGAATAATAAGTCAAGTTTTATAAAAACAATTGAGTTCTATCCCTTAAC
CTCTGCAATCTGTTTGATAATATATATGGCATGAGTGCACCATGGCATGTTAATAAAATGATAAATTAGTATGCATACATGTGCATATACACATTTAGGAAGTAAAATGC
ACATTTGGCCTACATTCTTTGGAGTTGTCTTTAGCTAGTTTTTTTTATCGGAGGGATGGTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTCTTTATATAGG
TATGAAAACCCCTCCCTAGCAGATGCGTTTTATT
Protein sequenceShow/hide protein sequence
MLADRIDGYKRQEKRLISEFKKHFGYPVGLGEDEVNGGIVNWVERFRPRKFGNVLDGEVEICKQIAQETGILVDPIYTLAAWEMTTFLSQKGAKVKADVVMLHTGGTLGM
FGIAQRYKSYFNNLKNV