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Carg27667 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27667
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDeubiquitinating enzyme MINDY-3
Genome locationCarg_Chr01:8258659..8260974
RNA-Seq ExpressionCarg27667
SyntenyCarg27667
Gene Ontology termsGO:0071108 - protein K48-linked deubiquitination (biological process)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
GO:1990380 - Lys48-specific deubiquitinase activity (molecular function)
InterPro domainsIPR003903 - Ubiquitin interacting motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607675.1 Ubiquitin carboxyl-terminal hydrolase MINDY-3, partial [Cucurbita argyrosperma subsp. sororia]1.5e-58100Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGDEVSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
KAG7037268.1 hypothetical protein SDJN02_00891 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-72100Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIREKEKEKDDVNSPHRTYTMHRDAD
        LESEANQLFSMVFGDEVSKEILAQWSNQGIREKEKEKDDVNSPHRTYTMHRDAD
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIREKEKEKDDVNSPHRTYTMHRDAD
XP_022926237.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita moschata]1.5e-58100Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGDEVSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
XP_022981420.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita maxima]6.4e-5797.71Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTR MQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF VKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGD+VSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
XP_023523420.1 ubiquitin carboxyl-terminal hydrolase MINDY-3 [Cucurbita pepo subsp. pepo]1.5e-58100Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGDEVSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
TrEMBL top hitse value%identityAlignment
A0A1S3CG70 Deubiquitinating enzyme MINDY-31.7e-5088.55Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLR ALRMSMQQ SPPEPKRSKPRDSPVG PT SSEES EVK+RR+QRELMAAAAEKRMLASKSYSEAVGS+SKSVKK K+FSVKD NLGK++
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
         E+EANQLFSMVFGDEVSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
A0A5A7UBJ2 Protein FAM188A1.7e-5088.55Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLR ALRMSMQQ SPPEPKRSKPRDSPVG PT SSEES EVK+RR+QRELMAAAAEKRMLASKSYSEAVGS+SKSVKK K+FSVKD NLGK++
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
         E+EANQLFSMVFGDEVSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
A0A6J1DJQ8 Deubiquitinating enzyme MINDY-33.9e-5290.84Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQ SPPEPKRSKPRDSP+G PT SSEES EVKTRR+QRELMAAAAEKRMLASKSYS+AVGSASKS KK+KEFSVKDVNLGK++
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGD VSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
A0A6J1EE00 Deubiquitinating enzyme MINDY-37.4e-59100Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGDEVSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
A0A6J1IZG3 Deubiquitinating enzyme MINDY-33.1e-5797.71Show/hide
Query:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM
        MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTR MQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEF VKDVNLGKKM
Subjt:  MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKM

Query:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
        LESEANQLFSMVFGD+VSKEILAQWSNQGIR
Subjt:  LESEANQLFSMVFGDEVSKEILAQWSNQGIR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43690.1 ubiquitin interaction motif-containing protein5.0e-2353.28Show/hide
Query:  MAD-QEEEDLRTALRMSMQQLSPPEPKRSKP-RDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSAS----KSVKKEKEFSVKDV
        MAD QE+EDL+ AL+MSM Q +PPEPKRSKP  +   G+ + S  ES E K+RR+QRELMAAAAEKRM+        V  A       V  +K+  V   
Subjt:  MAD-QEEEDLRTALRMSMQQLSPPEPKRSKP-RDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSAS----KSVKKEKEFSVKDV

Query:  NLGKKMLESEANQLFSMVFGDEVSKEILAQWSNQGIR
         LGK++   E++QLFS+VFG+EVSK +LAQW+NQGIR
Subjt:  NLGKKMLESEANQLFSMVFGDEVSKEILAQWSNQGIR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCAGGAGGAGGAGGACCTCCGGACAGCTCTACGGATGAGCATGCAGCAGCTCTCTCCGCCGGAACCCAAACGTAGCAAGCCTAGGGATTCCCCAGTCGGAGC
TCCGACTTTCTCATCGGAGGAGTCATCGGAAGTGAAGACCCGGAGGATGCAGCGGGAGCTTATGGCTGCTGCTGCTGAGAAGCGAATGTTGGCCTCTAAAAGCTATTCTG
AAGCAGTTGGCTCTGCATCGAAGTCCGTGAAGAAAGAGAAGGAGTTCAGTGTGAAGGACGTGAATTTGGGGAAAAAAATGTTGGAAAGTGAAGCGAACCAGTTGTTTTCA
ATGGTGTTCGGGGACGAGGTTTCCAAAGAAATACTTGCGCAATGGAGCAATCAGGGCATAAGAGAGAAAGAAAAAGAGAAAGATGATGTGAATTCTCCACACAGGACTTA
TACGATGCATCGGGATGCAGACTAG
mRNA sequenceShow/hide mRNA sequence
AAATGCGAGAAGAAAAGAAGGAAAAGAAATGTTCGTCATCATTTCCAAATTTCTCCTGTCACCTGCTTCTTCTAGGAATTAGGGTCGAATTCTTTGCGAGTCTCATCGAA
TTCGTCCTGTTTCCGTTTGATTTCAATTCTCAGCAACAGATTTATGATTTTATTGATTTAAGCTGTTGGAATTGGTGCGCCTTAATTTGGCTAGGCTAGGGCTTGTTGCT
CCCGGATCTGCGGGAATTCAATGGCGGATCAGGAGGAGGAGGACCTCCGGACAGCTCTACGGATGAGCATGCAGCAGCTCTCTCCGCCGGAACCCAAACGTAGCAAGCCT
AGGGATTCCCCAGTCGGAGCTCCGACTTTCTCATCGGAGGAGTCATCGGAAGTGAAGACCCGGAGGATGCAGCGGGAGCTTATGGCTGCTGCTGCTGAGAAGCGAATGTT
GGCCTCTAAAAGCTATTCTGAAGCAGTTGGCTCTGCATCGAAGTCCGTGAAGAAAGAGAAGGAGTTCAGTGTGAAGGACGTGAATTTGGGGAAAAAAATGTTGGAAAGTG
AAGCGAACCAGTTGTTTTCAATGGTGTTCGGGGACGAGGTTTCCAAAGAAATACTTGCGCAATGGAGCAATCAGGGCATAAGAGAGAAAGAAAAAGAGAAAGATGATGTG
AATTCTCCACACAGGACTTATACGATGCATCGGGATGCAGACTAG
Protein sequenceShow/hide protein sequence
MADQEEEDLRTALRMSMQQLSPPEPKRSKPRDSPVGAPTFSSEESSEVKTRRMQRELMAAAAEKRMLASKSYSEAVGSASKSVKKEKEFSVKDVNLGKKMLESEANQLFS
MVFGDEVSKEILAQWSNQGIREKEKEKDDVNSPHRTYTMHRDAD