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Carg27672 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27672
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionABC transporter C family member 2-like
Genome locationCarg_Chr19:3366561..3377932
RNA-Seq ExpressionCarg27672
SyntenyCarg27672
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571748.1 ABC transporter C family member 2, partial [Cucurbita argyrosperma subsp. sororia]4.6e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

KAG7011471.1 ABC transporter C family member, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-60100Show/hide
Query:  MFRALLFLYLDFVNFLSATVPLAIAIVVASMLSKRHYSYDVMVVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSKVMTKKKEWVEA
        MFRALLFLYLDFVNFLSATVPLAIAIVVASMLSKRHYSYDVMVVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSKVMTKKKEWVEA
Subjt:  MFRALLFLYLDFVNFLSATVPLAIAIVVASMLSKRHYSYDVMVVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSKVMTKKKEWVEA

Query:  VRRAFVLVGLGSNLYDLKVVKFKLHKV
        VRRAFVLVGLGSNLYDLKVVKFKLHKV
Subjt:  VRRAFVLVGLGSNLYDLKVVKFKLHKV

XP_022932938.1 ABC transporter C family member 2-like isoform X1 [Cucurbita moschata]4.6e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

XP_022973221.1 ABC transporter C family member 2-like isoform X2 [Cucurbita maxima]4.6e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

XP_022973223.1 ABC transporter C family member 2-like isoform X4 [Cucurbita maxima]4.6e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

TrEMBL top hitse value%identityAlignment
A0A6J1EYD7 ABC transporter C family member 2-like isoform X22.2e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

A0A6J1I6Y7 ABC transporter C family member 2-like isoform X32.2e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

A0A6J1I830 ABC transporter C family member 2-like isoform X22.2e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

A0A6J1IAT6 ABC transporter C family member 2-like isoform X12.2e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

A0A6J1ICF0 ABC transporter C family member 2-like isoform X42.2e-16100Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

SwissProt top hitse value%identityAlignment
Q42093 ABC transporter C family member 21.3e-1376.6Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNA VSLKRLEE+L  EE++LLPNPP+ P  PAISI+NGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

Q9C8G9 ABC transporter C family member 18.4e-1374.47Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        +VNA VSL RLEE+L  EE+VLLPNPP+ P  PAISI+NGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

Q9C8H0 ABC transporter C family member 122.9e-1376.6Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNA VSL+R+EELLL+EE++L  NPPL P  PAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

Q9C8H1 ABC transporter C family member 116.4e-1376.09Show/hide
Query:  VNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VNA VSL+R+EELLL+EE++L  NPPL P  PAISIKNGYFSWDSK
Subjt:  VNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

Arabidopsis top hitse value%identityAlignment
AT1G30400.1 multidrug resistance-associated protein 15.9e-1474.47Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        +VNA VSL RLEE+L  EE+VLLPNPP+ P  PAISI+NGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

AT1G30410.1 multidrug resistance-associated protein 132.0e-1476.6Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNA VSL+R+EELLL+EE++L  NPPL P  PAISIKNGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

AT1G30420.1 multidrug resistance-associated protein 124.5e-1476.09Show/hide
Query:  VNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VNA VSL+R+EELLL+EE++L  NPPL P  PAISIKNGYFSWDSK
Subjt:  VNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

AT2G34660.1 multidrug resistance-associated protein 29.2e-1576.6Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNA VSLKRLEE+L  EE++LLPNPP+ P  PAISI+NGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK

AT2G34660.2 multidrug resistance-associated protein 29.2e-1576.6Show/hide
Query:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK
        VVNA VSLKRLEE+L  EE++LLPNPP+ P  PAISI+NGYFSWDSK
Subjt:  VVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAGGGCTCTTCTGTTTTTGTACTTGGATTTTGTGAACTTCTTGTCTGCAACAGTTCCTCTTGCCATTGCCATTGTGGTAGCTTCAATGTTAAGCAAGCGACATTA
CAGTTATGATGTTATGGTGGTAAATGCTAAAGTATCACTAAAGCGACTAGAGGAGCTACTTCTTGCTGAAGAGAAAGTCTTACTTCCAAACCCACCATTAAATCCAAAAC
TTCCGGCCATCTCAATCAAGAATGGATACTTTTCTTGGGATTCAAAGGTTATGACTAAGAAGAAAGAGTGGGTGGAAGCGGTGCGTAGGGCTTTCGTTCTCGTCGGTCTG
GGTTCCAATCTATACGACCTCAAGGTCGTGAAGTTTAAGCTTCACAAGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAGGGCTCTTCTGTTTTTGTACTTGGATTTTGTGAACTTCTTGTCTGCAACAGTTCCTCTTGCCATTGCCATTGTGGTAGCTTCAATGTTAAGCAAGCGACATTA
CAGTTATGATGTTATGGTGGTAAATGCTAAAGTATCACTAAAGCGACTAGAGGAGCTACTTCTTGCTGAAGAGAAAGTCTTACTTCCAAACCCACCATTAAATCCAAAAC
TTCCGGCCATCTCAATCAAGAATGGATACTTTTCTTGGGATTCAAAGGTTATGACTAAGAAGAAAGAGTGGGTGGAAGCGGTGCGTAGGGCTTTCGTTCTCGTCGGTCTG
GGTTCCAATCTATACGACCTCAAGGTCGTGAAGTTTAAGCTTCACAAGGTATAA
Protein sequenceShow/hide protein sequence
MFRALLFLYLDFVNFLSATVPLAIAIVVASMLSKRHYSYDVMVVNAKVSLKRLEELLLAEEKVLLPNPPLNPKLPAISIKNGYFSWDSKVMTKKKEWVEAVRRAFVLVGL
GSNLYDLKVVKFKLHKV