; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27675 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27675
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGLTSCR1 domain-containing protein
Genome locationCarg_Chr19:3322601..3323737
RNA-Seq ExpressionCarg27675
SyntenyCarg27675
Gene Ontology termsNA
InterPro domainsIPR015671 - GLTSCR protein, conserved region


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571746.1 hypothetical protein SDJN03_28474, partial [Cucurbita argyrosperma subsp. sororia]4.3e-9599.47Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELK EIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
KAG7011468.1 hypothetical protein SDJN02_26374 [Cucurbita argyrosperma subsp. argyrosperma]8.6e-96100Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
XP_022932951.1 PH domain-containing protein DDB_G0275795-like [Cucurbita moschata]3.6e-9498.94Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELK EIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGW NNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
XP_022973214.1 ras-interacting protein RIP3 [Cucurbita maxima]2.1e-9498.94Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELK EIELRGKASKEAQDAKTRMAAMMQ DQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
XP_023554795.1 PH domain-containing protein DDB_G0275795-like [Cucurbita pepo subsp. pepo]4.3e-9599.47Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELK EIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
TrEMBL top hitse value%identityAlignment
A0A1S3BL97 bromodomain-containing protein DDB_G02807774.0e-8391.49Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFI TFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKR L ELK EIELRGKASKEA DAKTRMAAMMQTDQTR E Q
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMM+RA MRTGAHVGSQSSDVP    VG+QEQ HPSEMINGWGNN TQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
A0A6J1E2K6 bromodomain-containing protein DDB_G02807774.8e-8490.96Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFI TFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKR LLELK EIELRGKA KEA +AKTRMA+MMQTDQTR E Q
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMM R PMRTGA V SQS DV VGHGVGEQEQVHPSEM+NGWGNN TQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
A0A6J1EXS9 PH domain-containing protein DDB_G0275795-like1.8e-9498.94Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELK EIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGW NNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
A0A6J1H2M5 putative mediator of RNA polymerase II transcription subunit 264.8e-8489.42Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQ-TDQTRGET
        MLSRSQQWDHNISAKISEFI TFEKQVLAFNIITRKR LGEFRSEERLMFEQALMQEEKR LLELK EIELRGKA +EA DAK RMAAMMQ TD TR E 
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQ-TDQTRGET

Query:  QANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        QANEMMVR P+RTGAHVGSQSSDV VGH VGEQEQVHP+EM+NGWGNN TQGD+KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  QANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
A0A6J1IDW9 ras-interacting protein RIP31.0e-9498.94Show/hide
Query:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ
        MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELK EIELRGKASKEAQDAKTRMAAMMQ DQTRGETQ
Subjt:  MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQ

Query:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
        ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
Subjt:  ANEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03460.1 unknown protein3.7e-2843.94Show/hide
Query:  LSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQ-TDQTRGETQ
        L R QQWD+NI+AK++EF  TFE QV AF+ I +KR+ G+ R EERLM EQ L+ +E+   ++L  E+        +AQDA+ RMAA+ Q   Q R E  
Subjt:  LSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQ-TDQTRGETQ

Query:  AN---EMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEM---INGWG----NNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
             EMM R P+R  A          +G+   +   ++P+EM   +NGWG    NN +Q +EKE  ED LNDEE ENG+   H+ WR  G+FDLN R
Subjt:  AN---EMMVRAPMRTGAHVGSQSSDVPVGHGVGEQEQVHPSEM---INGWG----NNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
AT5G17510.1 unknown protein3.3e-5360.64Show/hide
Query:  LSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQA
        LSRSQQWD+NI+AK++EF  TFEKQ LAFNIITRKRA+GEFRSEERLM EQAL+Q+E++ L+ELK E++ R KA +EAQ+AK RMAA+ Q  Q++     
Subjt:  LSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQA

Query:  NEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQ-EQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR
         E+M R P+R  A VG+Q S++ + H +GEQ   ++P EM+NGWGNN +Q ++KE SED LNDEE ENG+TG  ++WRE GEFDLN+R
Subjt:  NEMMVRAPMRTGAHVGSQSSDVPVGHGVGEQ-EQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCACGGTCACAGCAATGGGACCATAACATCTCGGCCAAAATTTCCGAGTTTATTGGCACTTTTGAGAAGCAGGTATTGGCCTTCAACATCATAACTCGAAAAAG
AGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGGAAACTTCTTGAACTAAAAGGTGAGATTGAGTTGAGAGGGA
AGGCGAGCAAAGAGGCTCAGGACGCCAAAACTCGGATGGCAGCTATGATGCAGACTGACCAAACACGGGGCGAAACACAGGCTAACGAAATGATGGTTCGTGCTCCTATG
AGAACAGGTGCACATGTTGGATCCCAAAGCAGCGATGTTCCAGTTGGCCATGGTGTCGGGGAGCAGGAGCAAGTTCATCCAAGCGAAATGATCAATGGATGGGGAAACAA
CACCACACAGGGAGATGAGAAGGAAGCATCAGAGGACCTATTGAACGATGAGGAGGCCGAGAATGGCGATACGGGCATGCATGATAGCTGGCGTGAAGTCGGAGAATTTG
ATCTGAACACGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTTTCTTCTGCCTCATAGCTTCTGCCATACCATGTGGTAGCTGACTATGAGGCAGAAGAAGATGATAGAATCCTCGACTCGGATCCAACGGGCCAAATGTTGTC
ACGGTCACAGCAATGGGACCATAACATCTCGGCCAAAATTTCCGAGTTTATTGGCACTTTTGAGAAGCAGGTATTGGCCTTCAACATCATAACTCGAAAAAGAGCATTGG
GGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGGAAACTTCTTGAACTAAAAGGTGAGATTGAGTTGAGAGGGAAGGCGAGC
AAAGAGGCTCAGGACGCCAAAACTCGGATGGCAGCTATGATGCAGACTGACCAAACACGGGGCGAAACACAGGCTAACGAAATGATGGTTCGTGCTCCTATGAGAACAGG
TGCACATGTTGGATCCCAAAGCAGCGATGTTCCAGTTGGCCATGGTGTCGGGGAGCAGGAGCAAGTTCATCCAAGCGAAATGATCAATGGATGGGGAAACAACACCACAC
AGGGAGATGAGAAGGAAGCATCAGAGGACCTATTGAACGATGAGGAGGCCGAGAATGGCGATACGGGCATGCATGATAGCTGGCGTGAAGTCGGAGAATTTGATCTGAAC
ACGAGATGAAATGTTCGTGGAACAGCTTAATAATGGATGAAGTTAAAGAGTAGGGTTGGATGAAGAAAAATGATGAAGAGAAGTGCCTGCATATTTGAGGAACAATATCT
GAAAGCCGAATTGGCGGTTGAAGTTGAGGACGTCGGGTTCGTTGGATGTTTTAGTAGGAAGTACGTATGTTGTAGTTGTGTATTGGTTGATAAAATTAGTACAATTTCCA
GAAAAAGAACATATGCTTGGCTTGACTGAAAAGCAGTGTGATGTGTAGAAGATTTGAGAAGGAAGAAGAAATTGACGAGAAAGTAATACCTCAACTTGAATGCTCACAAT
ATTGTAATTTATTACGTTGTTTTATTTAACAACAAATATTTGAAACTAAAACAATTATATGAATGTCTGTATTATGC
Protein sequenceShow/hide protein sequence
MLSRSQQWDHNISAKISEFIGTFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRKLLELKGEIELRGKASKEAQDAKTRMAAMMQTDQTRGETQANEMMVRAPM
RTGAHVGSQSSDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR