; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27684 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27684
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4228 domain protein
Genome locationCarg_Chr11:4469881..4470732
RNA-Seq ExpressionCarg27684
SyntenyCarg27684
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3958.7Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------
        MGNSLSPCLHAISTTSRR SSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAG        +  FASF       
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------

Query:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN
           +G    + S Q   E +        +K+ +  F  R+ +             S PELQKHYDQLVGST  +  + SPKLE+
Subjt:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3957.61Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------
        MGNSLSPCLHAISTT R  SSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAG        +  FASF       
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------

Query:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN
           +G    + S Q   E +        +K+ +  F  R+ +             S PELQKHYDQLVGST  +  + SPKLE+
Subjt:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN

KAG7022127.1 hypothetical protein SDJN02_15856, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-102100Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQRR
        MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQRR
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQRR

Query:  RSHQLEREMLNSPVKVHLNTFEARMENSRPELQKHYDQLVGSTNDRASLLSPKLENCLSSNCVRLYESELIVFIFPGWVKKPYREHRS
        RSHQLEREMLNSPVKVHLNTFEARMENSRPELQKHYDQLVGSTNDRASLLSPKLENCLSSNCVRLYESELIVFIFPGWVKKPYREHRS
Subjt:  RSHQLEREMLNSPVKVHLNTFEARMENSRPELQKHYDQLVGSTNDRASLLSPKLENCLSSNCVRLYESELIVFIFPGWVKKPYREHRS

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]6.1e-4159.24Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------
        MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAG        +  FASF       
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------

Query:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN
           +G    + S Q   E +        +K+ +  F  R+ +             S PELQKHYDQLVGST  +  + SPKLE+
Subjt:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]1.5e-3957.61Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------
        MGNSLSPCLHAISTT RR SSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQL+AG        +  FASF       
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------

Query:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN
           +G    + S Q   E +        +K+ +  F  R+ +             S PELQKHYDQLVGST  +  + SPKLE+
Subjt:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein2.3e-2543.16Show/hide
Query:  MGNSLSPCLHAIS-TTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRK----PI-------------
        MGN++SPCL +IS +   R  S V L+F+NG TK L G+HH AGEIMFQFPDMM+CHA+SFFIGHPIPSL+IDDQL+AG      PI             
Subjt:  MGNSLSPCLHAIS-TTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRK----PI-------------

Query:  ------------SFSGLTYFASFVGVYQRRRSHQLEREMLNSPVKVHLNTFEARMEN-----SRPELQKHYDQLVGSTNDRASLLSPKLE
                     FSG   F    G   +     +   ++    +  ++  E+         S PEL+KHYDQLVGST  +  + SPKLE
Subjt:  ------------SFSGLTYFASFVGVYQRRRSHQLEREMLNSPVKVHLNTFEARMEN-----SRPELQKHYDQLVGSTNDRASLLSPKLE

A0A1S3BP11 uncharacterized protein LOC1034919837.8e-2644.56Show/hide
Query:  MGNSLSPCLHAISTTSRR-SSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQR
        MGN++SPCL +IS + RR   SAV L+F++G TK L GNHH AGEIMFQFPDMM+CHA+SFFIGHPIPSL+IDD+LL G   +    +  FAS V V   
Subjt:  MGNSLSPCLHAISTTSRR-SSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQR

Query:  RR-----SHQLEREMLNSP--------------VKVHLNTFEARMEN------------------SRPELQKHYDQLVGSTNDRASLLSPKLE
               +  +  E  + P              +KV +  F  R+ +                  S PEL+KHYDQLVGST  +  + SPKLE
Subjt:  RR-----SHQLEREMLNSP--------------VKVHLNTFEARMEN------------------SRPELQKHYDQLVGSTNDRASLLSPKLE

A0A5A7UN34 DUF4228 domain protein7.8e-2644.56Show/hide
Query:  MGNSLSPCLHAISTTSRR-SSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQR
        MGN++SPCL +IS + RR   SAV L+F++G TK L GNHH AGEIMFQFPDMM+CHA+SFFIGHPIPSL+IDD+LL G   +    +  FAS V V   
Subjt:  MGNSLSPCLHAISTTSRR-SSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQR

Query:  RR-----SHQLEREMLNSP--------------VKVHLNTFEARMEN------------------SRPELQKHYDQLVGSTNDRASLLSPKLE
               +  +  E  + P              +KV +  F  R+ +                  S PEL+KHYDQLVGST  +  + SPKLE
Subjt:  RR-----SHQLEREMLNSP--------------VKVHLNTFEARMEN------------------SRPELQKHYDQLVGSTNDRASLLSPKLE

A0A6J1EHY7 uncharacterized protein LOC1114342512.9e-4159.24Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------
        MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAG        +  FASF       
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASF-------

Query:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN
           +G    + S Q   E +        +K+ +  F  R+ +             S PELQKHYDQLVGST  +  + SPKLE+
Subjt:  ---VGVYQRRRSHQLEREMLNSP-----VKVHLNTFEARMEN-------------SRPELQKHYDQLVGSTNDRASLLSPKLEN

A0A6J1HB88 uncharacterized protein LOC1114617443.8e-2543.55Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRK----PISFSGLTYFASFVGV
        MGN++SPCL   S T+R  SSAV LIFS+G T+ L G+HH AGEIMFQFPDM++CHADSFFIGH IPSLAI+D+LLAG      PI    L    S   +
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRK----PISFSGLTYFASFVGV

Query:  YQRRRSHQLEREMLNS-------------PVKVHLNTFEARMEN--------------SRPELQKHYDQLVGSTNDRASLLSPKLE
              ++   +  +S              +KV +  F  R+ +              S PEL+KHYDQLVG++  +  + SP LE
Subjt:  YQRRRSHQLEREMLNS-------------PVKVHLNTFEARMEN--------------SRPELQKHYDQLVGSTNDRASLLSPKLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12340.1 unknown protein2.0e-1349.38Show/hide
Query:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGV-TKSLTG-NHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGR
        MG SL   +++     RR    V L+F   V TK+L G   H+AGEIMF+FPD ++CHADSF+IG  IP+LA+DD L+ G+
Subjt:  MGNSLSPCLHAISTTSRRSSSAVNLIFSNGV-TKSLTG-NHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTCTCTCTCTCCATGTCTTCATGCCATTTCCACCACCAGCCGCCGCAGCTCCTCCGCCGTCAATCTCATCTTCTCCAACGGCGTCACAAAATCCCTCACCGG
AAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCGGACATGATGATATGCCACGCTGATTCCTTCTTCATCGGCCACCCGATTCCCTCCTTAGCCATCGACGACC
AACTCCTTGCGGGTCGGAAACCTATTTCGTTCTCCGGATTGACTTATTTCGCTTCCTTCGTTGGCGTTTATCAACGTCGTCGCTCGCATCAATTGGAGCGGGAAATGCTA
AATTCTCCGGTCAAAGTCCATTTGAATACATTCGAGGCACGAATGGAGAATTCACGACCGGAGTTGCAGAAGCATTACGATCAGCTCGTCGGGTCGACGAACGATAGGGC
AAGTTTGCTCTCGCCGAAGTTGGAGAATTGTTTATCTTCGAATTGTGTTCGTCTGTACGAGTCCGAATTGATCGTCTTCATCTTTCCCGGATGGGTTAAGAAGCCTTACC
GGGAACACCGTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTCTCTCTCTCCATGTCTTCATGCCATTTCCACCACCAGCCGCCGCAGCTCCTCCGCCGTCAATCTCATCTTCTCCAACGGCGTCACAAAATCCCTCACCGG
AAACCACCACATCGCCGGCGAGATCATGTTCCAATTCCCGGACATGATGATATGCCACGCTGATTCCTTCTTCATCGGCCACCCGATTCCCTCCTTAGCCATCGACGACC
AACTCCTTGCGGGTCGGAAACCTATTTCGTTCTCCGGATTGACTTATTTCGCTTCCTTCGTTGGCGTTTATCAACGTCGTCGCTCGCATCAATTGGAGCGGGAAATGCTA
AATTCTCCGGTCAAAGTCCATTTGAATACATTCGAGGCACGAATGGAGAATTCACGACCGGAGTTGCAGAAGCATTACGATCAGCTCGTCGGGTCGACGAACGATAGGGC
AAGTTTGCTCTCGCCGAAGTTGGAGAATTGTTTATCTTCGAATTGTGTTCGTCTGTACGAGTCCGAATTGATCGTCTTCATCTTTCCCGGATGGGTTAAGAAGCCTTACC
GGGAACACCGTTCCTAG
Protein sequenceShow/hide protein sequence
MGNSLSPCLHAISTTSRRSSSAVNLIFSNGVTKSLTGNHHIAGEIMFQFPDMMICHADSFFIGHPIPSLAIDDQLLAGRKPISFSGLTYFASFVGVYQRRRSHQLEREML
NSPVKVHLNTFEARMENSRPELQKHYDQLVGSTNDRASLLSPKLENCLSSNCVRLYESELIVFIFPGWVKKPYREHRS