; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27685 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27685
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4228 domain protein
Genome locationCarg_Chr11:4478409..4479023
RNA-Seq ExpressionCarg27685
SyntenyCarg27685
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588218.1 Signal recognition particle subunit SRP68, partial [Cucurbita argyrosperma subsp. sororia]7.4e-101100Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
        MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL

Query:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISE
        AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISE
Subjt:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISE

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-9589.66Show/hide
Query:  SPCYVSISVSRRRSSAVKLVFSDGF-----TRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLA
        SP   SIS  + R S  K V   GF       LLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLA
Subjt:  SPCYVSISVSRRRSSAVKLVFSDGF-----TRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLA

Query:  ALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLKQ
        ALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLKQ
Subjt:  ALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLKQ

Query:  KEG
        KEG
Subjt:  KEG

XP_022927436.1 uncharacterized protein LOC111434260 [Cucurbita moschata]2.2e-113100Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
        MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL

Query:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK
        AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK
Subjt:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK

Query:  QKEG
        QKEG
Subjt:  QKEG

XP_023003160.1 uncharacterized protein LOC111496859 [Cucurbita maxima]2.1e-10895.63Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
        MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHT+PSLGTDDKLI GETYFILPLDLFASFDVLTTSSL
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL

Query:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA--DDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFK
        AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA  D  GGGQFLCSTPELKKHYDQLVG+KGPVW+PKLESISEY+IRHSPYKFVGFK
Subjt:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA--DDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFK

Query:  LKQKEG
        LKQKEG
Subjt:  LKQKEG

XP_023530354.1 uncharacterized protein LOC111792952 [Cucurbita pepo subsp. pepo]4.8e-10895.63Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
        MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHH+AGEIMFRFPNTMICHADSFFIGHT+PSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL

Query:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISP--ADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFK
        AALGA+KAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISP  AD GGGGQFLCSTPELKKHYDQLVGSKGPVW+PKLESISEY+IR SPYKFVGFK
Subjt:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISP--ADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFK

Query:  LKQKEG
        LKQKEG
Subjt:  LKQKEG

TrEMBL top hitse value%identityAlignment
A0A0A0LZV5 Uncharacterized protein1.2e-7771.36Show/hide
Query:  MGNAAASPCYVSISVSR--RRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS
        MGN A SPC +SIS+SR  RR S VKLVF++G T+ L G HH AGEIMF+FP+ M+CHA+SFFIGH IPSL  DD+LIAGETY ILP+D FAS DVL+TS
Subjt:  MGNAAASPCYVSISVSR--RRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS

Query:  SLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-KGPVWSPKLESISEYEIRHSP
        SLA +GA      KFSGPCPFEYVR  NG+VLIKV PEFI+RLIS A       +GGGG FLCSTPELKKHYDQLVGS KG VWSPKLE+ISEY+IR+SP
Subjt:  SLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-KGPVWSPKLESISEYEIRHSP

Query:  YKFVGFKLKQKEG
         +FVGFKLKQKEG
Subjt:  YKFVGFKLKQKEG

A0A1S3BP11 uncharacterized protein LOC1034919832.5e-7871.36Show/hide
Query:  MGNAAASPCYVSISVS--RRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS
        MGN A SPC +SIS+S  R R SAVKLVF+DG T+ L G HH AGEIMF+FP+ M+CHA+SFFIGH IPSL  DD+L+ GETY +LP+D FAS DVL+TS
Subjt:  MGNAAASPCYVSISVS--RRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS

Query:  SLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-KGPVWSPKLESISEYEIRHSP
        SLA +GA      KFSGPCPFEYVR  NGRVLIKV PEFI+RLISPA        GGGG FLCSTPELKKHYDQLVGS KG VWSPKLE+ISEY+IR+SP
Subjt:  SLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-KGPVWSPKLESISEYEIRHSP

Query:  YKFVGFKLKQKEG
         +FVGFKLKQKEG
Subjt:  YKFVGFKLKQKEG

A0A5A7UN34 DUF4228 domain protein2.5e-7871.36Show/hide
Query:  MGNAAASPCYVSISVS--RRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS
        MGN A SPC +SIS+S  R R SAVKLVF+DG T+ L G HH AGEIMF+FP+ M+CHA+SFFIGH IPSL  DD+L+ GETY +LP+D FAS DVL+TS
Subjt:  MGNAAASPCYVSISVS--RRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS

Query:  SLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-KGPVWSPKLESISEYEIRHSP
        SLA +GA      KFSGPCPFEYVR  NGRVLIKV PEFI+RLISPA        GGGG FLCSTPELKKHYDQLVGS KG VWSPKLE+ISEY+IR+SP
Subjt:  SLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-KGPVWSPKLESISEYEIRHSP

Query:  YKFVGFKLKQKEG
         +FVGFKLKQKEG
Subjt:  YKFVGFKLKQKEG

A0A6J1EHN5 uncharacterized protein LOC1114342601.1e-113100Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
        MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL

Query:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK
        AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK
Subjt:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK

Query:  QKEG
        QKEG
Subjt:  QKEG

A0A6J1KR03 uncharacterized protein LOC1114968591.0e-10895.63Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL
        MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHT+PSLGTDDKLI GETYFILPLDLFASFDVLTTSSL
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSL

Query:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA--DDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFK
        AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA  D  GGGQFLCSTPELKKHYDQLVG+KGPVW+PKLESISEY+IRHSPYKFVGFK
Subjt:  AALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPA--DDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFK

Query:  LKQKEG
        LKQKEG
Subjt:  LKQKEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21010.1 unknown protein2.4e-0422.58Show/hide
Query:  ICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQ-
        IC +DS +    IP++ +++ L A + YF+LP+    S   LT S +AAL  + +  ++ S        + +  R  ++++P  +L   + + +G G + 
Subjt:  ICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQ-

Query:  -------FLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK
               F+  T  +K        S G   S  + ++  Y  + +      F+LK
Subjt:  -------FLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLK

AT1G28190.1 unknown protein5.1e-1532.96Show/hide
Query:  VKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLF---ASFDVLTTSSLAALGAQKAKTVKFSGPCPF
        +KLV SDG  ++   +  +  E+   FP   IC +D  +IG   P L   + L  G  YF+LP D F    SF  + T      G    K  +   P PF
Subjt:  VKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLF---ASFDVLTTSSLAALGAQKAKTVKFSGPCPF

Query:  EYVRNANG-RVLIKVAPEFILRLI----------SPADDGGGGQ---FLCSTPELKKHYDQLVGSKGPVWSPKLESISE
           +   G R+ I+V+ EF+  L+             ++ GGG+    +C+T +LKK Y QLVG +   W PKLE+I+E
Subjt:  EYVRNANG-RVLIKVAPEFILRLI----------SPADDGGGGQ---FLCSTPELKKHYDQLVGSKGPVWSPKLESISE

AT5G12340.1 unknown protein8.0e-4544.59Show/hide
Query:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGF-TRLLPG-KHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS
        MG +  + C+    + RRR   V LVF +   T+ L G K H+AGEIMF FP+ ++CHADSF+IG  IP+L  DD LI G+TYF+LP++ F  + +LTTS
Subjt:  MGNAAASPCYVSISVSRRRSSAVKLVFSDGF-TRLLPG-KHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTS

Query:  SLAALGA------QKAKTVKF---SGPCPFEYVRNANGRVLIKVAPEFILRLI--------SPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES
         L+   +           + F   S P PFEY +  NG++LIKV+PEFI+ LI          A   G    +C++PELKK YDQLVG++  +WSP L++
Subjt:  SLAALGA------QKAKTVKF---SGPCPFEYVRNANGRVLIKVAPEFILRLI--------SPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLES

Query:  ISEYEIRHSPYKFVGFKLKQKE
        ISE++IR SP +F G   KQ E
Subjt:  ISEYEIRHSPYKFVGFKLKQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAATGCCGCCGCCTCTCCATGTTACGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGG
TAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGCCACACCATCCCCTCCTTAGGCACCGACGACA
AACTCATCGCCGGTGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGATGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCAAAGACC
GTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGA
CGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGG
AGTATGAAATTAGGCATTCACCCTACAAATTTGTAGGGTTTAAACTCAAACAGAAAGAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAATGCCGCCGCCTCTCCATGTTACGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGG
TAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGCCACACCATCCCCTCCTTAGGCACCGACGACA
AACTCATCGCCGGTGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGATGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCAAAGACC
GTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGA
CGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGG
AGTATGAAATTAGGCATTCACCCTACAAATTTGTAGGGTTTAAACTCAAACAGAAAGAAGGCTAA
Protein sequenceShow/hide protein sequence
MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKT
VKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLKQKEG