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Carg27705 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27705
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:7148209..7149466
RNA-Seq ExpressionCarg27705
SyntenyCarg27705
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014174.1 hypothetical protein SDJN02_24348, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-57100Show/hide
Query:  MAPVIRPLRKCLQLSSSSSHKALICKRTDKIPSHSHLKTLHFRHAQIRIRRNLISDMNLISLSQSVFSYENSCLLLELLALLDIDFCTYGFLAIPTSSVD
        MAPVIRPLRKCLQLSSSSSHKALICKRTDKIPSHSHLKTLHFRHAQIRIRRNLISDMNLISLSQSVFSYENSCLLLELLALLDIDFCTYGFLAIPTSSVD
Subjt:  MAPVIRPLRKCLQLSSSSSHKALICKRTDKIPSHSHLKTLHFRHAQIRIRRNLISDMNLISLSQSVFSYENSCLLLELLALLDIDFCTYGFLAIPTSSVD

Query:  IALKLRRMKWEHCAQMMM
        IALKLRRMKWEHCAQMMM
Subjt:  IALKLRRMKWEHCAQMMM
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCAGTGATTCGACCATTGAGGAAATGCCTTCAGCTTTCTTCTTCTTCTTCTCACAAAGCACTAATTTGCAAGCGCACCGACAAAATCCCATCACATTCCCACCT
GAAAACCCTACATTTCCGACATGCTCAGATTCGTATTCGAAGGAACTTGATTTCGGATATGAACTTGATTTCTCTCTCCCAATCAGTATTTTCATACGAGAACAGTTGTC
TGCTGTTGGAGCTATTGGCGCTGTTGGATATCGATTTTTGCACTTATGGTTTCCTTGCCATTCCAACTAGCAGCGTGGACATAGCGCTTAAATTAAGGAGAATGAAGTGG
GAACATTGCGCCCAAATGATGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCAGTGATTCGACCATTGAGGAAATGCCTTCAGCTTTCTTCTTCTTCTTCTCACAAAGCACTAATTTGCAAGCGCACCGACAAAATCCCATCACATTCCCACCT
GAAAACCCTACATTTCCGACATGCTCAGATTCGTATTCGAAGGAACTTGATTTCGGATATGAACTTGATTTCTCTCTCCCAATCAGTATTTTCATACGAGAACAGTTGTC
TGCTGTTGGAGCTATTGGCGCTGTTGGATATCGATTTTTGCACTTATGGTTTCCTTGCCATTCCAACTAGCAGCGTGGACATAGCGCTTAAATTAAGGAGAATGAAGTGG
GAACATTGCGCCCAAATGATGATGTGA
Protein sequenceShow/hide protein sequence
MAPVIRPLRKCLQLSSSSSHKALICKRTDKIPSHSHLKTLHFRHAQIRIRRNLISDMNLISLSQSVFSYENSCLLLELLALLDIDFCTYGFLAIPTSSVDIALKLRRMKW
EHCAQMMM