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Carg27710 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27710
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionethylene-responsive transcription factor ERF084-like
Genome locationCarg_Chr17:7113307..7114309
RNA-Seq ExpressionCarg27710
SyntenyCarg27710
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575618.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]8.6e-2096.36Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
        MP IVPVESTSSLPISSKQNR+GNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

KAG7014161.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2098.18Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
        MP IVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

KAG7014169.1 hypothetical protein SDJN02_24343 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-21100Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
        MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

XP_022953923.1 ethylene-responsive transcription factor ERF084-like [Cucurbita moschata]4.5e-21100Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
        MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

XP_023548449.1 ethylene-responsive transcription factor ERF084-like [Cucurbita pepo subsp. pepo]1.3e-2098.18Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
        MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLE DLINAD
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

TrEMBL top hitse value%identityAlignment
A0A0A0KA16 AP2/ERF domain-containing protein1.2e-1176.92Show/hide
Query:  MPLIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL
        MPL+VP+ESTS+   SS +  RNGNKLKKN RKCSVVTSAAHLFSPG+ELDL
Subjt:  MPLIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL

A0A5A7US44 AP2 domain-containing protein7.1e-1278.85Show/hide
Query:  MPLIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL
        MPL+VPVESTS+   SS +  RNGNKLKKN RKCSVVTSAAHLFSPG+ELDL
Subjt:  MPLIVPVESTSSLPISSKQ-NRNGNKLKKNGRKCSVVTSAAHLFSPGLELDL

A0A6J1GPN9 ethylene-responsive transcription factor ERF084-like2.2e-21100Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
        MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD

A0A6J1HB06 ethylene-responsive transcription factor ERF084-like4.8e-0862.71Show/hide
Query:  MPLIVPVESTSSLPISS----KQNRNGNKL----KKNGRKCSVVTSAAHLFSPGLELDL
        MPL+VP+ESTSS   SS    +   NGNKL    K NGRKC+VVT+AAHLFS G+ELDL
Subjt:  MPLIVPVESTSSLPISS----KQNRNGNKL----KKNGRKCSVVTSAAHLFSPGLELDL

A0A6J1JRR3 ethylene-responsive transcription factor ERF084-like2.9e-1391.11Show/hide
Query:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSP
        MPLIVPVESTSSLPISSK+NRNGN LKKNGRKCSVVTS AHLF P
Subjt:  MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTGATTGTACCGGTGGAATCCACGTCATCATTACCCATATCATCGAAACAGAATCGTAACGGTAATAAGTTGAAGAAGAATGGCCGGAAATGCTCGGTGGTTAC
GTCGGCGGCGCATTTGTTCAGTCCGGGATTGGAGCTTGATTTGATCAACGCCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCTATTTCCTCCATCTCTTGAATCCAACGGCCACAAATCCTCCCTCGAGATCGCCTCCGGCTCCTAAGGAGTACGGAAGCGGCCATGGGGAAGATGGTCTGCAGA
GATACGAGACCGAATAGGACGATGCCGGCACTGGCTGGGGACATTCGACACAGCGGAGGAAGCGGCGCGTGCATACGACGCAGCGGCGAGGCGATTGAGAGGATCGAAAG
CGAGAACTAACTTCGAAATGCCGTTGATTGTACCGGTGGAATCCACGTCATCATTACCCATATCATCGAAACAGAATCGTAACGGTAATAAGTTGAAGAAGAATGGCCGG
AAATGCTCGGTGGTTACGTCGGCGGCGCATTTGTTCAGTCCGGGATTGGAGCTTGATTTGATCAACGCCGATTAA
Protein sequenceShow/hide protein sequence
MPLIVPVESTSSLPISSKQNRNGNKLKKNGRKCSVVTSAAHLFSPGLELDLINAD