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Carg27720 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27720
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB30.2/SPRY domain-containing protein
Genome locationCarg_Chr11:4419185..4421751
RNA-Seq ExpressionCarg27720
SyntenyCarg27720
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
GO:0060776 - simple leaf morphogenesis (biological process)
GO:0080182 - histone H3-K4 trimethylation (biological process)
GO:0048188 - Set1C/COMPASS complex (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR037353 - Histone methyltransferase complex subunit ASH2
IPR043136 - B30.2/SPRY domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588198.1 Protein TRAUCO, partial [Cucurbita argyrosperma subsp. sororia]1.8e-7497.74Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
        DFQGR LPQPM EVPYHGF+KQVENGEKNTVVA
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA

KAG7022094.1 Protein TRAUCO, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-7699.25Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
        DFQGRRLPQPMVEVPYHGF+KQVENGEKNTVVA
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA

KAG7022120.1 Protein TRAUCO, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-82100Show/hide
Query:  MERRDIRICDVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNF
        MERRDIRICDVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNF
Subjt:  MERRDIRICDVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNF

Query:  GPDFEFFPEDFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
        GPDFEFFPEDFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
Subjt:  GPDFEFFPEDFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA

XP_022925791.1 protein TRAUCO-like [Cucurbita moschata]2.6e-76100Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
        DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA

XP_023529538.1 protein TRAUCO-like [Cucurbita pepo subsp. pepo]9.8e-7699.25Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
        DFQGRRLPQPMVEVPYHGF+KQVENGEKNTVVA
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA

TrEMBL top hitse value%identityAlignment
A0A5D3D5T3 Protein TRAUCO6.2e-6889.63Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DV+GFYINLPDGA YAPK PH+VWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYT PNQPNCVVKFNFGPDFE FPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVV
        D QGR LPQPM+EVPYHGF+ QVENG   EKNTVV
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVV

A0A6J1DLX9 protein TRAUCO6.2e-6889.63Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DV+GFYINLPDGA YAPK PH+VWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYT PNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVV
        DF+GR L QPMVEVPYHGF+ Q ENG   EKNTVV
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVV

A0A6J1ED55 protein TRAUCO-like1.2e-76100Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
        DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA

A0A6J1HSC1 protein TRAUCO-like isoform X14.9e-7395.59Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVVA
        DFQG  LPQPMVEVPYHGF+KQVENG   EKNTVVA
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVVA

A0A6J1JKQ3 protein TRAUCO-like6.2e-6888.89Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        D++GFYINLPDGA YAPK PH+VWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYT PNQPNCVVKFNFGPDFE FPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVV
        DFQGR LPQPMV+VPYHGF+ Q+ENG   EKNTVV
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVENG---EKNTVV

SwissProt top hitse value%identityAlignment
Q91X20 Set1/Ash2 histone methyltransferase complex subunit ASH21.7e-1438.94Show/hide
Query:  DVLGFYINLPDGASYAPKSP------------HYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVK
        DVLGFYINLP+    A   P             Y++++ + ++   +  E+  K  P SEI F+KNGV QGVA+ D+  G Y+PA S+Y      +C V 
Subjt:  DVLGFYINLPDGASYAPKSP------------HYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVK

Query:  FNFGPDFEFFPED
         NFGP F++ P+D
Subjt:  FNFGPDFEFFPED

Q94545 Set1/Ash2 histone methyltransferase complex subunit ASH21.1e-1036.36Show/hide
Query:  DVLGFYINLPDGAS--YAP---KSPHYVWYKGQRYICAPEGKEEPPK---VVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFG
        D LGF I LP+ AS  Y P   K    V +K   Y    +   E  K   ++ GS I FFKNG  QGVAF D+  G Y+PA S++      +  V  NFG
Subjt:  DVLGFYINLPDGAS--YAP---KSPHYVWYKGQRYICAPEGKEEPPK---VVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFG

Query:  PDFEFFPEDFQGRRLPQPMVEVPYHGFNKQVE
        P F++          P+ +VE    G + +VE
Subjt:  PDFEFFPEDFQGRRLPQPMVEVPYHGFNKQVE

Q9C8J7 Protein TRAUCO6.0e-6079.23Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DV+GFYINLPDG S+APK PHYV+YKGQRYICAP+ KEEPPKVVPGSEISFFKNGVCQG AFTD+ GGRYYPAASMYT P+Q NC+VKFNFGP FEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVE-NGEKN
        DF GR  P+PM EVPYHGFN ++E NG ++
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVE-NGEKN

Q9UBL3 Set1/Ash2 histone methyltransferase complex subunit ASH22.2e-1438.46Show/hide
Query:  DVLGFYINLPDGASYAPKSP------------HYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVK
        DVLGFYINLP+    A   P             Y++++ + ++   +  E+  K  P SEI F+KNGV QGVA+ D+  G Y+PA S+Y      +C V 
Subjt:  DVLGFYINLPDGASYAPKSP------------HYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVK

Query:  FNFGPDFEFFPEDFQGR
         NFGP F++ P+D   R
Subjt:  FNFGPDFEFFPEDFQGR

Arabidopsis top hitse value%identityAlignment
AT1G51450.1 TRAUCO4.2e-6179.23Show/hide
Query:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE
        DV+GFYINLPDG S+APK PHYV+YKGQRYICAP+ KEEPPKVVPGSEISFFKNGVCQG AFTD+ GGRYYPAASMYT P+Q NC+VKFNFGP FEFFPE
Subjt:  DVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPE

Query:  DFQGRRLPQPMVEVPYHGFNKQVE-NGEKN
        DF GR  P+PM EVPYHGFN ++E NG ++
Subjt:  DFQGRRLPQPMVEVPYHGFNKQVE-NGEKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGAGGGATATAAGGATATGTGATGTTCTTGGTTTTTATATCAATTTGCCGGATGGGGCTTCATATGCGCCCAAGTCACCGCATTATGTTTGGTATAAGGGGCA
GAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCTCCTAAAGTAGTTCCAGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCGTTTACAGATC
TGAACGGAGGTCGTTATTATCCTGCAGCCTCAATGTACACTCAACCGAATCAACCAAATTGTGTTGTCAAGTTCAACTTCGGCCCTGATTTCGAATTCTTTCCAGAGGAC
TTTCAAGGTCGTCGTTTGCCACAACCCATGGTCGAAGTACCTTACCACGGATTCAATAAACAAGTCGAAAACGGAGAGAAAAACACAGTAGTCGCC
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGAGGGATATAAGGATATGTGATGTTCTTGGTTTTTATATCAATTTGCCGGATGGGGCTTCATATGCGCCCAAGTCACCGCATTATGTTTGGTATAAGGGGCA
GAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCTCCTAAAGTAGTTCCAGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCGTTTACAGATC
TGAACGGAGGTCGTTATTATCCTGCAGCCTCAATGTACACTCAACCGAATCAACCAAATTGTGTTGTCAAGTTCAACTTCGGCCCTGATTTCGAATTCTTTCCAGAGGAC
TTTCAAGGTCGTCGTTTGCCACAACCCATGGTCGAAGTACCTTACCACGGATTCAATAAACAAGTCGAAAACGGAGAGAAAAACACAGTAGTCGCC
Protein sequenceShow/hide protein sequence
MERRDIRICDVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPED
FQGRRLPQPMVEVPYHGFNKQVENGEKNTVVA