; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27723 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27723
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFPL domain-containing protein
Genome locationCarg_Chr05:4247554..4250331
RNA-Seq ExpressionCarg27723
SyntenyCarg27723
Gene Ontology termsGO:0008333 - endosome to lysosome transport (biological process)
GO:0016197 - endosomal transport (biological process)
GO:1901096 - regulation of autophagosome maturation (biological process)
GO:0005770 - late endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0036020 - endolysosome membrane (cellular component)
InterPro domainsIPR019155 - CLEC16A/TT9, N-terminal
IPR039272 - CLEC16A/TT9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598900.1 Protein TRANSPARENT TESTA 9, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6071.13Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDEVNEDFVIEALRSIS
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

KAG7029852.1 Protein CLEC16A-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-105100Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFVLNCLLF
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFVLNCLLF
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFVLNCLLF

Query:  FSTK
        FSTK
Subjt:  FSTK

XP_022996573.1 uncharacterized protein LOC111491772 isoform X4 [Cucurbita maxima]6.3e-6070.1Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDE+NEDFVIEALRS+S
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

XP_023545848.1 uncharacterized protein LOC111805160 isoform X1 [Cucurbita pepo subsp. pepo]6.3e-6070.62Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDEVNEDFVIEALRSIS
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNL+SEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

XP_023545850.1 uncharacterized protein LOC111805160 isoform X3 [Cucurbita pepo subsp. pepo]6.3e-6070.62Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDEVNEDFVIEALRSIS
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNL+SEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

TrEMBL top hitse value%identityAlignment
A0A6J1K2B0 uncharacterized protein LOC111491772 isoform X33.1e-6070.1Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDE+NEDFVIEALRS+S
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

A0A6J1K559 uncharacterized protein LOC111491772 isoform X23.1e-6070.1Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDE+NEDFVIEALRS+S
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

A0A6J1K759 uncharacterized protein LOC111491772 isoform X13.1e-6070.1Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDE+NEDFVIEALRS+S
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

A0A6J1K937 uncharacterized protein LOC111491772 isoform X53.1e-6070.1Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDE+NEDFVIEALRS+S
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

A0A6J1KBC7 uncharacterized protein LOC111491772 isoform X43.1e-6070.1Show/hide
Query:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS
        MWFSFWRSRDPFSLEEL                                                      RYLTDQLLNIEIVDE+NEDFVIEALRS+S
Subjt:  MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSIS

Query:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV
        ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLR +
Subjt:  ELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFV

SwissProt top hitse value%identityAlignment
P46578 Protein CLEC16A homolog6.4e-2342.15Show/hide
Query:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL
        +YL   L   E V E N+  ++EALR+I+E++ +GDQ+DAS F+FF+E+Q++  F++I++   T  +++QLLQT++I+ +N++ E ++Y+L S  H+N +
Subjt:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL

Query:  ITYAFDFRNDELLSYYMSFLR
        I++ FD +NDE+++YY+SFL+
Subjt:  ITYAFDFRNDELLSYYMSFLR

Q2KHT3 Protein CLEC16A1.7e-2039.67Show/hide
Query:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL
        +YL   L     V E N + ++E +RSI+E++ +GDQ+D+S F+FF+EK +   F+ IL+      V +QLLQT++I+ +N+  E ++YYL S  ++N +
Subjt:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL

Query:  ITYAFDFRNDELLSYYMSFLR
        I + FDF ++E+++YY+SFL+
Subjt:  ITYAFDFRNDELLSYYMSFLR

Q54GS1 Protein CLEC16A homolog9.0e-2543.8Show/hide
Query:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL
        RYL + L   +I+   N++ ++E+LR I+E++ +GDQHD  FF+FF+EK IMG F++ L    +  V++QLLQT+SI+++NL++E++IY+L S  +IN++
Subjt:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL

Query:  ITYAFDFRNDELLSYYMSFLR
        I + FDF ++E+L Y++S L+
Subjt:  ITYAFDFRNDELLSYYMSFLR

Q80U30 Protein CLEC16A1.7e-2039.67Show/hide
Query:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL
        +YL   L     V E N + ++E +RSI+E++ +GDQ+D+S F+FF+EK +   F+ IL+      V +QLLQT++I+ +N+  E ++YYL S  ++N +
Subjt:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL

Query:  ITYAFDFRNDELLSYYMSFLR
        I + FDF ++E+++YY+SFL+
Subjt:  ITYAFDFRNDELLSYYMSFLR

Q8W4P9 Protein TRANSPARENT TESTA 91.2e-4575.61Show/hide
Query:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL
        RYLTDQL  I+IV+E N+D VIEALRSI+E++TYGDQHD  FFEFFMEKQ+MGEFVRIL++S+T TVS+QLLQTMSI+IQNLKSE AIYYLFS E++N L
Subjt:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL

Query:  ITYAFDFRNDELLSYYMSFLRFV
        ITY FDF+++ELLSYY+SFLR V
Subjt:  ITYAFDFRNDELLSYYMSFLRFV

Arabidopsis top hitse value%identityAlignment
AT3G28430.1 unknown protein8.5e-4775.61Show/hide
Query:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL
        RYLTDQL  I+IV+E N+D VIEALRSI+E++TYGDQHD  FFEFFMEKQ+MGEFVRIL++S+T TVS+QLLQTMSI+IQNLKSE AIYYLFS E++N L
Subjt:  RYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHDASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKL

Query:  ITYAFDFRNDELLSYYMSFLRFV
        ITY FDF+++ELLSYY+SFLR V
Subjt:  ITYAFDFRNDELLSYYMSFLRFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTTTCCTTCTGGAGATCCAGGGATCCATTCTCGTTGGAAGAGCTCAGTCAAATTGAACCAATGGAGCTTGTTTATATTTTTGTTCTGTGTTCTAAGTTGTTATT
ACGTTTTATTCATGGAACAAATTTAGCTGCAAAAGGTATGGCTCGACTTGCCTACCTTATTTCTCGATTCTGTTTCAAAATTTTGTTAAATTTACTGGGACACAGGTATT
TAACTGATCAGCTGTTAAACATTGAAATAGTCGATGAGGTTAACGAGGATTTTGTTATTGAGGCGCTGCGATCAATATCAGAGTTGATAACTTACGGTGACCAGCATGAT
GCTTCCTTCTTCGAGTTTTTCATGGAGAAGCAAATCATGGGAGAATTTGTACGTATTTTGCAAATTAGTAGGACTGCTACTGTTTCACTTCAGTTGTTGCAGACAATGAG
CATTATAATTCAGAATCTTAAAAGTGAACATGCTATATATTACCTATTCAGTACTGAACATATTAACAAGCTAATAACATATGCATTTGATTTCCGGAATGATGAGCTGT
TGTCTTACTATATGTCTTTCTTAAGGTTTGTTTTGAATTGTTTGCTTTTCTTTTCAACGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATCGGCTCCCTTCTTCTTCACATCACTTGCATTTTCAGTTTTGTTTGCAGTATCTACGGAACAAAGAACCCAAAAATTTCCTGATCAAGATCTCCGTTGTTCTTGCTCTA
TCGAGAGAGCTCTCGATCAGATTGAAAATTGTTCTTAATTGTTCTCTGTCGAGGTCAGGCAATCACTGTGGTAAAGAAGAACATCGCTGAAATCATTTTGAAACCTTCAA
TTCTGGGATGGATTGTGTTTAGGGTGCAGAATGATTACTGGGTATCTGAATTCGGGGCTCTGATTGTTCAGCCATGTGGTTTTCCTTCTGGAGATCCAGGGATCCATTCT
CGTTGGAAGAGCTCAGTCAAATTGAACCAATGGAGCTTGTTTATATTTTTGTTCTGTGTTCTAAGTTGTTATTACGTTTTATTCATGGAACAAATTTAGCTGCAAAAGGT
ATGGCTCGACTTGCCTACCTTATTTCTCGATTCTGTTTCAAAATTTTGTTAAATTTACTGGGACACAGGTATTTAACTGATCAGCTGTTAAACATTGAAATAGTCGATGA
GGTTAACGAGGATTTTGTTATTGAGGCGCTGCGATCAATATCAGAGTTGATAACTTACGGTGACCAGCATGATGCTTCCTTCTTCGAGTTTTTCATGGAGAAGCAAATCA
TGGGAGAATTTGTACGTATTTTGCAAATTAGTAGGACTGCTACTGTTTCACTTCAGTTGTTGCAGACAATGAGCATTATAATTCAGAATCTTAAAAGTGAACATGCTATA
TATTACCTATTCAGTACTGAACATATTAACAAGCTAATAACATATGCATTTGATTTCCGGAATGATGAGCTGTTGTCTTACTATATGTCTTTCTTAAGGTTTGTTTTGAA
TTGTTTGCTTTTCTTTTCAACGAAGTAA
Protein sequenceShow/hide protein sequence
MWFSFWRSRDPFSLEELSQIEPMELVYIFVLCSKLLLRFIHGTNLAAKGMARLAYLISRFCFKILLNLLGHRYLTDQLLNIEIVDEVNEDFVIEALRSISELITYGDQHD
ASFFEFFMEKQIMGEFVRILQISRTATVSLQLLQTMSIIIQNLKSEHAIYYLFSTEHINKLITYAFDFRNDELLSYYMSFLRFVLNCLLFFSTK