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Carg27724 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27724
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFPL domain-containing protein
Genome locationCarg_Chr05:4250411..4252654
RNA-Seq ExpressionCarg27724
SyntenyCarg27724
Gene Ontology termsGO:0001708 - cell fate specification (biological process)
GO:0008333 - endosome to lysosome transport (biological process)
GO:0009718 - anthocyanin-containing compound biosynthetic process (biological process)
GO:0016197 - endosomal transport (biological process)
GO:0044090 - positive regulation of vacuole organization (biological process)
GO:1901096 - regulation of autophagosome maturation (biological process)
GO:1903415 - flavonoid transport from endoplasmic reticulum to plant-type vacuole (biological process)
GO:0005770 - late endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0036020 - endolysosome membrane (cellular component)
InterPro domainsIPR019155 - CLEC16A/TT9, N-terminal
IPR039272 - CLEC16A/TT9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598900.1 Protein TRANSPARENT TESTA 9, partial [Cucurbita argyrosperma subsp. sororia]7.3e-4998.04Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

KAG7029853.1 Protein CLEC16A-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-50100Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

XP_023545848.1 uncharacterized protein LOC111805160 isoform X1 [Cucurbita pepo subsp. pepo]7.3e-4998.04Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

XP_023545849.1 uncharacterized protein LOC111805160 isoform X2 [Cucurbita pepo subsp. pepo]7.3e-4998.04Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

XP_023545850.1 uncharacterized protein LOC111805160 isoform X3 [Cucurbita pepo subsp. pepo]7.3e-4998.04Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

TrEMBL top hitse value%identityAlignment
A0A6J1EN85 uncharacterized protein LOC111436147 isoform X11.3e-4897.06Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVK QNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

A0A6J1EN88 uncharacterized protein LOC111436147 isoform X51.3e-4897.06Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVK QNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

A0A6J1EPA5 uncharacterized protein LOC111436147 isoform X31.3e-4897.06Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVK QNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

A0A6J1ESN2 uncharacterized protein LOC111436147 isoform X21.3e-4897.06Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVK QNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

A0A6J1ESN7 uncharacterized protein LOC111436147 isoform X61.3e-4897.06Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        M F+RAISGKLNKNTISLLVK QNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Query:  KR
        KR
Subjt:  KR

SwissProt top hitse value%identityAlignment
Q2KHT3 Protein CLEC16A3.4e-0939.18Show/hide
Query:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDD--CVNRFITSPPHAEYFSNLVTFFRKQCINLNELV
        F++ +S KLN +T+       N     F +Y EAI+F  H ESM+  AVR +TLNVY V  D   +  +I       YFSNLV F     I L++ V
Subjt:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDD--CVNRFITSPPHAEYFSNLVTFFRKQCINLNELV

Q54GS1 Protein CLEC16A homolog3.3e-1237.23Show/hide
Query:  IRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELV
        ++A+S KL+K+T++      N     FP+Y EAI+F  H+E+MI  A+R LTLN++ V +  +  +I +     YFSN+V F R+ C++L++++
Subjt:  IRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELV

Q80U30 Protein CLEC16A5.9e-0939.18Show/hide
Query:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDD--CVNRFITSPPHAEYFSNLVTFFRKQCINLNELV
        F++ +S KLN +T+       N     F +Y EAI+F  H ESM+  AVR +TLNVY V  D   +  +I       YFSNLV F     I L+  V
Subjt:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDD--CVNRFITSPPHAEYFSNLVTFFRKQCINLNELV

Q8W4P9 Protein TRANSPARENT TESTA 97.4e-3670.41Show/hide
Query:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        F+RA+SGKLNK+TISLL+KT+N  VVSFP+YVE IQFAFHEE+MI TAVRALTLNVYHVGD+ VN ++ SPPH EYFS L++FF+KQC++L+ +V  T
Subjt:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET

Q9VEV4 Protein CLEC16A homolog3.3e-1242.27Show/hide
Query:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELV
        ++F++ +S KLN +TI       N     FP+Y EAI+F  H ESM+  AVR ++LNVY V +  + RFI     A YFSNLV F  K  + L+  V
Subjt:  MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELV

Arabidopsis top hitse value%identityAlignment
AT3G28430.1 unknown protein5.2e-3770.41Show/hide
Query:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET
        F+RA+SGKLNK+TISLL+KT+N  VVSFP+YVE IQFAFHEE+MI TAVRALTLNVYHVGD+ VN ++ SPPH EYFS L++FF+KQC++L+ +V  T
Subjt:  FIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTTATAAGAGCAATTAGTGGAAAGCTGAACAAGAACACAATCTCCCTTCTTGTGAAAACACAAAATGGTAAAGTAGTATCTTTTCCAATGTACGTAGAGGCTAT
ACAATTTGCTTTTCATGAAGAAAGTATGATCCACACAGCAGTTCGGGCCTTGACACTTAATGTATACCATGTTGGAGATGATTGTGTCAATAGATTCATCACCAGTCCTC
CTCATGCAGAATATTTCTCAAATTTAGTGACCTTTTTTAGGAAGCAGTGCATTAACTTGAATGAGTTGGTCTTTGAGACAAAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTTATAAGAGCAATTAGTGGAAAGCTGAACAAGAACACAATCTCCCTTCTTGTGAAAACACAAAATGGTAAAGTAGTATCTTTTCCAATGTACGTAGAGGCTAT
ACAATTTGCTTTTCATGAAGAAAGTATGATCCACACAGCAGTTCGGGCCTTGACACTTAATGTATACCATGTTGGAGATGATTGTGTCAATAGATTCATCACCAGTCCTC
CTCATGCAGAATATTTCTCAAATTTAGTGACCTTTTTTAGGAAGCAGTGCATTAACTTGAATGAGTTGGTCTTTGAGACAAAGAGGTAA
Protein sequenceShow/hide protein sequence
MVFIRAISGKLNKNTISLLVKTQNGKVVSFPMYVEAIQFAFHEESMIHTAVRALTLNVYHVGDDCVNRFITSPPHAEYFSNLVTFFRKQCINLNELVFETKR