CuGenDBv2

Gene ID	Carg27754
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquinol oxidase
Genome location	Carg_Chr18:4334771..4337096
RNA-Seq Expression	Carg27754
Synteny	Carg27754
Gene Ontology terms	GO:0010230 - alternative respiration (biological process) GO:0016117 - carotenoid biosynthetic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0070469 - respirasome (cellular component) GO:0009916 - alternative oxidase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0102721 - ubiquinol:oxygen oxidoreductase activity (molecular function)
InterPro domains	IPR002680 - Alternative oxidase IPR038659 - Alternative oxidase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6573483.1 Ubiquinol oxidase 4, chloroplastic/chromoplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-97

98.93

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWI+KLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

KAG7012624.1 Ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-101

100

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVLIMLGFF
        KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVLIMLGFF
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVLIMLGFF

XP_022955227.1 ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita moschata]

3.6e-97

98.93

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAE SSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

XP_022994224.1 ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita maxima]

1.3e-91

94.65

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAW SSSSALFGTSSVQL PYNT NI SFRIGTAFSRRSFSSRPLVSRK CRVLATVLKEDEEEVVIEESFPPKASPV++GEGGSEGGAE SSSN LD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

XP_023523838.1 ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita pepo subsp. pepo]

2.3e-96

98.4

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAE SSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQSVNVLLTDSVIRILDAFYHDR+YPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M130 Ubiquinol oxidase

7.6e-77

81.82

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIA  SSSS LF  SSV+LKP NT N+ SFRI T     SFS+RPL+SRKSCRV+ATVLKEDEE+VV+EESFPPKASP++ GEGGS  G E SSSNG D
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWI+KLEQSVNVLLTDSVI+ILDAFYHDRHY RFFVLETIARVPYFAF+SVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

A0A1S3C992 Ubiquinol oxidase

1.5e-77

82.35

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIA  SSSSA+F  SSV+LKP NT N+ SFRI T     SFS+RPL+SRKSCRV+ATVLKEDEE+VV+EESFPPKASPV+ GEGGS  G + SSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQS+NVLLTDSVI+ILDAFYHDRHY RFFVLETIARVPYFAF+SVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

A0A5A7UI87 Ubiquinol oxidase

1.5e-77

82.35

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIA  SSSSA+F  SSV+LKP NT N+ SFRI T     SFS+RPL+SRKSCRV+ATVLKEDEE+VV+EESFPPKASPV+ GEGGS  G + SSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQS+NVLLTDSVI+ILDAFYHDRHY RFFVLETIARVPYFAF+SVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

A0A6J1GSZ7 Ubiquinol oxidase

1.7e-97

98.93

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAE SSSNGLD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

A0A6J1K2B2 Ubiquinol oxidase

6.4e-92

94.65

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Query:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD
        MSIAW SSSSALFGTSSVQL PYNT NI SFRIGTAFSRRSFSSRPLVSRK CRVLATVLKEDEEEVVIEESFPPKASPV++GEGGSEGGAE SSSN LD
Subjt:  MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLD

Query:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  KWIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

SwissProt top hits

e value

%identity

Alignment

Q56X52 Ubiquinol oxidase 4, chloroplastic/chromoplastic

4.6e-47

58.6

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Query:  SALFGTSSVQL---KPYNTINIDSFRIGTAFSRR-----SFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLDK
        +A+ G SS  L   +P  T+      +  + S R       SSR L+ R + RV AT+L++DEE+VV+EESF  KA      E   E     SS++  + 
Subjt:  SALFGTSSVQL---KPYNTINIDSFRIGTAFSRR-----SFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLDK

Query:  WIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        WIIKLEQ VNV LTDSVI+ILD  Y DR Y RFFVLETIARVPYFAF+SVLHMYE+FGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  WIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

Arabidopsis top hits

e value

%identity

Alignment

AT4G22260.1 Alternative oxidase family protein

3.3e-48

58.6

Show/hide

Query:  SALFGTSSVQL---KPYNTINIDSFRIGTAFSRR-----SFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLDK
        +A+ G SS  L   +P  T+      +  + S R       SSR L+ R + RV AT+L++DEE+VV+EESF  KA      E   E     SS++  + 
Subjt:  SALFGTSSVQL---KPYNTINIDSFRIGTAFSRR-----SFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLDK

Query:  WIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL
        WIIKLEQ VNV LTDSVI+ILD  Y DR Y RFFVLETIARVPYFAF+SVLHMYE+FGWWRRADYLKVHFAESWNEMHHLLIME L
Subjt:  WIIKLEQSVNVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCGATTGCTTGGTGTTCTTCGTCTTCGGCACTTTTTGGAACCTCCTCCGTCCAATTGAAACCATACAACACCATCAACATAGATTCCTTCAGAATCGGCACTGCCTT
CTCTCGCCGTTCCTTCTCTTCACGTCCTTTAGTTTCCAGAAAGTCGTGTCGAGTGCTGGCAACTGTTCTGAAGGAAGATGAGGAAGAAGTGGTTATTGAGGAGTCATTTC
CTCCCAAGGCTTCTCCTGTCGAGAAAGGGGAAGGGGGCAGTGAGGGAGGAGCAGAGAAATCATCCTCCAATGGCTTGGATAAATGGATCATTAAGCTTGAACAATCTGTT
AATGTTCTTCTCACGGATTCAGTTATAAGAATTCTTGACGCTTTTTACCACGACAGACACTATCCAAGGTTCTTTGTCTTGGAAACTATTGCAAGGGTTCCTTACTTTGC
GTTTCTGTCAGTTCTGCATATGTATGAAAGTTTTGGCTGGTGGAGAAGAGCTGATTATCTGAAAGTTCACTTTGCTGAGAGCTGGAATGAGATGCATCATTTGCTGATCA
TGGAGGTACTTATTATGTTGGGCTTCTTTTAA

mRNA sequence

Show/hide mRNA sequence

CATACTTCCACAGATTCCCTTCCACCATTCCAACCTCGGTTTCACGATTCTCTCCCTCGCTCCGAAACCATGTCGATTGCTTGGTGTTCTTCGTCTTCGGCACTTTTTGG
AACCTCCTCCGTCCAATTGAAACCATACAACACCATCAACATAGATTCCTTCAGAATCGGCACTGCCTTCTCTCGCCGTTCCTTCTCTTCACGTCCTTTAGTTTCCAGAA
AGTCGTGTCGAGTGCTGGCAACTGTTCTGAAGGAAGATGAGGAAGAAGTGGTTATTGAGGAGTCATTTCCTCCCAAGGCTTCTCCTGTCGAGAAAGGGGAAGGGGGCAGT
GAGGGAGGAGCAGAGAAATCATCCTCCAATGGCTTGGATAAATGGATCATTAAGCTTGAACAATCTGTTAATGTTCTTCTCACGGATTCAGTTATAAGAATTCTTGACGC
TTTTTACCACGACAGACACTATCCAAGGTTCTTTGTCTTGGAAACTATTGCAAGGGTTCCTTACTTTGCGTTTCTGTCAGTTCTGCATATGTATGAAAGTTTTGGCTGGT
GGAGAAGAGCTGATTATCTGAAAGTTCACTTTGCTGAGAGCTGGAATGAGATGCATCATTTGCTGATCATGGAGGTACTTATTATGTTGGGCTTCTTTTAAAGGGCATAG
TATCCTTTTCCTTGAATTGACTATTTGCTACAAGATTTTCCTTTTCATCATCTCTGTGAACTGGTTGAGTATATGCACCCATCTAGACATTGAATTACTGAATAAATTTA
CTCCTTTTCTGACTTGAGTGCAGGAATTGGGGGGTAATGATTGGTGGTTTGATCGCTTTCTTGCTCAACATATCGCTGTTGCTTACTATTTTATGACAGTTGTTATGTAT
ATGATTAGCCCGAGAATGGCCTGTAAGTATTGTTGGAGTTGATAAATTAACAGCTGATTATACTCTCTTTCTTGCATCCTTTTATGGGCTTGTTCATTTTGCTTTTGTAA
TCGTAACAAATTACCTAGAAAACAGAAAATTGGCATGGCTTTATGCTTTTGTAACGGCTCAAACCAACCGCTATTAGATATTGTCCTCTTTGAGTTTTCTCTTTCGGGGT
TCCCCTCAAGGTTTTTAAAACGTGTCTGTTAGGGAGAGGTTTCCACCCCTCTCCAATGTGGGATCTCACAATCCACCCCTCCTTCGAGGGCCAGCGTCTTCGCTGGGACT
TGTTCC

Protein sequence

Show/hide protein sequence

MSIAWCSSSSALFGTSSVQLKPYNTINIDSFRIGTAFSRRSFSSRPLVSRKSCRVLATVLKEDEEEVVIEESFPPKASPVEKGEGGSEGGAEKSSSNGLDKWIIKLEQSV
NVLLTDSVIRILDAFYHDRHYPRFFVLETIARVPYFAFLSVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEVLIMLGFF

Carg27754 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome