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Carg27764 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27764
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionactin cytoskeleton-regulatory complex protein PAN1-like
Genome locationCarg_Chr10:10786951..10788747
RNA-Seq ExpressionCarg27764
SyntenyCarg27764
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024059.1 hypothetical protein SDJN02_15088, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-97100Show/hide
Query:  MLQPSGDVSITAAKRTPSRRRVCDQGDDRLCAVPDADKVQLQRVRFVDACQPASARTVAHHQADGYCLTWNDMTEVDQNPDQFTMEYLVTELGEEGAQHQ
        MLQPSGDVSITAAKRTPSRRRVCDQGDDRLCAVPDADKVQLQRVRFVDACQPASARTVAHHQADGYCLTWNDMTEVDQNPDQFTMEYLVTELGEEGAQHQ
Subjt:  MLQPSGDVSITAAKRTPSRRRVCDQGDDRLCAVPDADKVQLQRVRFVDACQPASARTVAHHQADGYCLTWNDMTEVDQNPDQFTMEYLVTELGEEGAQHQ

Query:  ALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNAVQCRRRLLQFSSAAVFLSLVPPQPSSSGFVLIFYSVATGILPTSVYAFILA
        ALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNAVQCRRRLLQFSSAAVFLSLVPPQPSSSGFVLIFYSVATGILPTSVYAFILA
Subjt:  ALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNAVQCRRRLLQFSSAAVFLSLVPPQPSSSGFVLIFYSVATGILPTSVYAFILA

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]2.2e-1162.69Show/hide
Query:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA
        WND+TE DQNP+QF +EYLVTE GE GA H+  S P A A  T  PTPT T  TPP+P+KFAT R A
Subjt:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA

XP_023521510.1 uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo]1.5e-0450Show/hide
Query:  NDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA
        ND+ EVDQNP+QFT+EYL+TE  E GAQH+ LSP  A              A  P+P++FAT R A
Subjt:  NDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA

XP_023522344.1 uncharacterized protein LOC111786267, partial [Cucurbita pepo subsp. pepo]3.7e-0655.22Show/hide
Query:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA
        WND+ E D NP+QFT+EYLVTE  EEGAQHQ  SPP A A              PPEP++FAT R A
Subjt:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA

XP_023536261.1 uncharacterized protein LOC111797484 [Cucurbita pepo subsp. pepo]5.9e-0447.62Show/hide
Query:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFAT
        WND+ E D N +QFT++YL+TE  E GAQHQ  SPP A A              PPEP++F T
Subjt:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFAT

TrEMBL top hitse value%identityAlignment
A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.1e-1162.69Show/hide
Query:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA
        WND+TE DQNP+QF +EYLVTE GE GA H+  S P A A  T  PTPT T  TPP+P+KFAT R A
Subjt:  WNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAPDTSTPTPTATPATPPEPMKFATLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGCCGAGCGGCGACGTCTCCATCACCGCCGCGAAGAGGACGCCGAGTCGTCGTCGAGTGTGTGATCAAGGAGACGACCGCCTCTGTGCAGTACCTGATGCTGA
CAAGGTCCAACTACAACGAGTGAGGTTTGTTGATGCGTGCCAACCTGCAAGCGCAAGGACTGTGGCACACCATCAAGCCGACGGATATTGCTTGACATGGAACGACATGA
CCGAGGTGGACCAGAACCCAGATCAATTCACGATGGAGTACCTCGTCACCGAGCTGGGAGAAGAAGGAGCGCAGCACCAAGCACTATCACCACCGCTAGCAACTGCACCG
GACACGTCTACGCCAACACCGACCGCAACTCCTGCTACGCCCCCTGAACCAATGAAGTTCGCAACACTACGTAATGCGGTTCAGTGTCGCCGCCGCCTCCTCCAGTTCAG
TAGTGCTGCCGTCTTTCTTTCGCTCGTGCCACCGCAGCCTTCCTCCAGCGGGTTTGTACTGATTTTCTACTCTGTTGCTACTGGTATTCTCCCAACCTCCGTCTATGCTT
TTATTCTCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCAGCCGAGCGGCGACGTCTCCATCACCGCCGCGAAGAGGACGCCGAGTCGTCGTCGAGTGTGTGATCAAGGAGACGACCGCCTCTGTGCAGTACCTGATGCTGA
CAAGGTCCAACTACAACGAGTGAGGTTTGTTGATGCGTGCCAACCTGCAAGCGCAAGGACTGTGGCACACCATCAAGCCGACGGATATTGCTTGACATGGAACGACATGA
CCGAGGTGGACCAGAACCCAGATCAATTCACGATGGAGTACCTCGTCACCGAGCTGGGAGAAGAAGGAGCGCAGCACCAAGCACTATCACCACCGCTAGCAACTGCACCG
GACACGTCTACGCCAACACCGACCGCAACTCCTGCTACGCCCCCTGAACCAATGAAGTTCGCAACACTACGTAATGCGGTTCAGTGTCGCCGCCGCCTCCTCCAGTTCAG
TAGTGCTGCCGTCTTTCTTTCGCTCGTGCCACCGCAGCCTTCCTCCAGCGGGTTTGTACTGATTTTCTACTCTGTTGCTACTGGTATTCTCCCAACCTCCGTCTATGCTT
TTATTCTCGCTTGA
Protein sequenceShow/hide protein sequence
MLQPSGDVSITAAKRTPSRRRVCDQGDDRLCAVPDADKVQLQRVRFVDACQPASARTVAHHQADGYCLTWNDMTEVDQNPDQFTMEYLVTELGEEGAQHQALSPPLATAP
DTSTPTPTATPATPPEPMKFATLRNAVQCRRRLLQFSSAAVFLSLVPPQPSSSGFVLIFYSVATGILPTSVYAFILA