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Carg27771 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27771
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhydrophobic protein LTI6B-like
Genome locationCarg_Chr10:10688773..10689323
RNA-Seq ExpressionCarg27771
SyntenyCarg27771
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7818031.1 hydrophobic protein RCI2B [Senna tora]1.5e-1174.14Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MADP TANCIDILLAII    LGVFLKFGC+VEFWICL+LT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

KAG7024052.1 Hydrophobic protein LTI6B [Cucurbita argyrosperma subsp. argyrosperma]2.7e-24100Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHLAVYAITK
        MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHLAVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHLAVYAITK

RWW57479.1 hypothetical protein BHE74_00035732 [Ensete ventricosum]4.4e-1174.14Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MAD  TANCIDILLAII    LGVFLKFGCQVEFWICL+LT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

XP_022961459.1 hydrophobic protein LTI6B-like [Cucurbita moschata]4.0e-1275.86Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MADP TANCIDILLAI+    LGVFLKFGCQVEFWICLVLT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

XP_038879764.1 hydrophobic protein LTI6B-like [Benincasa hispida]4.4e-1174.14Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MAD AT NCIDILLAI+    LGVFLKFGCQVEFWICLVLT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

TrEMBL top hitse value%identityAlignment
A0A0B0P7E4 Hydrophobic RCI2B-like protein4.8e-1172.41Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MAD +TA CIDILLAII    LGVFLKFGCQVEFWICLVLT     PG + A+YAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

A0A2K3L766 Hydrophobic protein LTI6A-like3.6e-1174.14Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MAD  TANCIDILLAII    LGVFLKFGC VEFWICLVLT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

A0A5D2MMY2 Uncharacterized protein4.8e-1172.41Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MAD +TA CIDILLAII    LGVFLKFGCQVEFWICLVLT     PG + A+YAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

A0A6J1HE36 hydrophobic protein LTI6B-like1.9e-1275.86Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MADP TANCIDILLAI+    LGVFLKFGCQVEFWICLVLT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

A0A6J1HUN0 hydrophobic protein LTI6B-like1.9e-1275.86Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MADP TANCIDILLAI+    LGVFLKFGCQVEFWICLVLT     PG + AVYAITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B3.9e-1067.92Show/hide
Query:  TANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        TANCIDIL+AII    LGVFLKFGC  EFWICL+LT     PG + A+YAITK
Subjt:  TANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

Q0DKW8 Hydrophobic protein LTI6B3.9e-1067.92Show/hide
Query:  TANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        TANCIDIL+AII    LGVFLKFGC  EFWICL+LT     PG + A+YAITK
Subjt:  TANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

Q8H5T6 Hydrophobic protein LTI6A3.3e-0962.07Show/hide
Query:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        MAD +TA CIDI+LAII    LGVF KFGC +EFWICL+LT     PG + AV+ ITK
Subjt:  MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

Q9ZNQ7 Hydrophobic protein RCI2A6.2e-0855.56Show/hide
Query:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        +TA  +DI++AI+    LGVFL+FGC VEFWICLVLT     PG + A+Y +TK
Subjt:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

Q9ZNS6 Hydrophobic protein RCI2B1.2e-0861.11Show/hide
Query:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        +TA  ++I+LAII    LGVFLKFGC+VEFWICL+LT     PG L A+Y ITK
Subjt:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.9e-0443.48Show/hide
Query:  LLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        +L  I    +GVFL++G  +EFW+CL+LT     PG + A+Y +TK
Subjt:  LLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

AT2G24040.1 Low temperature and salt responsive protein family7.3e-0448.98Show/hide
Query:  CIDILLAIISCRRLGVFLKFG-CQVEFWICLVLTCSNISPGHL-AVYAI
        C +I +AI+    +GV L+ G C VEF+ICL+LTC    PG + A+YAI
Subjt:  CIDILLAIISCRRLGVFLKFG-CQVEFWICLVLTCSNISPGHL-AVYAI

AT2G38905.1 Low temperature and salt responsive protein family1.3e-0552.17Show/hide
Query:  IDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHLAVYAI
        ++I+LAI+    +GVFL++GC VEFWICL+LT     PG   +YAI
Subjt:  IDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHLAVYAI

AT3G05880.1 Low temperature and salt responsive protein family4.4e-0955.56Show/hide
Query:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        +TA  +DI++AI+    LGVFL+FGC VEFWICLVLT     PG + A+Y +TK
Subjt:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK

AT3G05890.1 Low temperature and salt responsive protein family8.9e-1061.11Show/hide
Query:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK
        +TA  ++I+LAII    LGVFLKFGC+VEFWICL+LT     PG L A+Y ITK
Subjt:  ATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHL-AVYAITK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACCCGGCGACCGCCAACTGCATCGATATCCTTCTGGCTATTATCTCCTGCCGCCGTCTCGGAGTGTTTCTCAAATTTGGATGCCAGGTTGAGTTTTGGATCTG
TTTGGTGCTAACTTGTTCGAATATCTCCCCGGGACATCTTGCTGTTTATGCTATCACCAAGTGA
mRNA sequenceShow/hide mRNA sequence
CATCGCTACCCACTACCACTGCTTCTAACGCCTCCTCCATTCCCCTCTGTTTGAATCCGAAGAAATTTCATAGCAAAACAATGGCCGACCCGGCGACCGCCAACTGCATC
GATATCCTTCTGGCTATTATCTCCTGCCGCCGTCTCGGAGTGTTTCTCAAATTTGGATGCCAGGTTGAGTTTTGGATCTGTTTGGTGCTAACTTGTTCGAATATCTCCCC
GGGACATCTTGCTGTTTATGCTATCACCAAGTGATTCCGAGATGTGCTTTCATCATCAAAACTGTGTGTGTTTAGTTGGTTTTGTGCTATGTGTTTGTGTGCTGTGCTTC
GTTTCTAAATTCTTTTTTCTTGTGTTTTGTGGCTGTTGTTGTTGTTGGTTGTATTGATTGAATTGGTTGCTGTAAACAAAATCCATCCTACTTTTTCTTCAACTTAATTA
CAACTTTACTTATATTTT
Protein sequenceShow/hide protein sequence
MADPATANCIDILLAIISCRRLGVFLKFGCQVEFWICLVLTCSNISPGHLAVYAITK