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Carg27780 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27780
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:7401060..7404120
RNA-Seq ExpressionCarg27780
SyntenyCarg27780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607635.1 Protein ROH1, partial [Cucurbita argyrosperma subsp. sororia]8.0e-05100Show/hide
Query:  ITEHLQSWLQQCVMLWTMHEYNKQK
        ITEHLQSWLQQCVMLWTMHEYNKQK
Subjt:  ITEHLQSWLQQCVMLWTMHEYNKQK
KAG7037239.1 hypothetical protein SDJN02_00862, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-88100Show/hide
Query:  MLRLLQITEHLQSWLQQCVMLWTMHEYNKQKEEESASAYVESDALLLEDSLFFTTDEWNFPMGFANMEFLYLQVLSISKCFYMFPASPAPLELSPTYLDP
        MLRLLQITEHLQSWLQQCVMLWTMHEYNKQKEEESASAYVESDALLLEDSLFFTTDEWNFPMGFANMEFLYLQVLSISKCFYMFPASPAPLELSPTYLDP
Subjt:  MLRLLQITEHLQSWLQQCVMLWTMHEYNKQKEEESASAYVESDALLLEDSLFFTTDEWNFPMGFANMEFLYLQVLSISKCFYMFPASPAPLELSPTYLDP

Query:  STASIDSYHNVVSCKTCNRKMREMRERERKRNNGWMDGRTDGWTDGPGSLAVRRNMELVSSEKKE
        STASIDSYHNVVSCKTCNRKMREMRERERKRNNGWMDGRTDGWTDGPGSLAVRRNMELVSSEKKE
Subjt:  STASIDSYHNVVSCKTCNRKMREMRERERKRNNGWMDGRTDGWTDGPGSLAVRRNMELVSSEKKE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAGATTATTGCAGATTACAGAACATCTTCAAAGTTGGCTTCAGCAGTGTGTAATGTTATGGACAATGCACGAGTATAATAAACAAAAGGAAGAAGAGAGCGCCTC
AGCATACGTCGAATCTGATGCCTTGCTGCTCGAAGATTCTTTATTCTTTACGACCGATGAATGGAATTTTCCGATGGGCTTTGCAAATATGGAATTTCTATATCTTCAGG
TTCTTTCAATTTCCAAGTGTTTCTATATGTTTCCGGCTTCCCCAGCTCCACTCGAGTTGTCCCCAACTTATCTCGATCCGAGTACCGCTTCCATTGATAGTTACCACAAT
GTCGTCTCTTGCAAAACCTGCAACAGGAAAATGAGAGAAATGAGAGAGAGAGAGAGAAAGAGAAACAATGGATGGATGGATGGACGGACGGATGGATGGACGGACGGACC
TGGGAGTTTGGCAGTGAGAAGGAACATGGAATTGGTTTCATCAGAGAAGAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAGATTATTGCAGATTACAGAACATCTTCAAAGTTGGCTTCAGCAGTGTGTAATGTTATGGACAATGCACGAGTATAATAAACAAAAGGAAGAAGAGAGCGCCTC
AGCATACGTCGAATCTGATGCCTTGCTGCTCGAAGATTCTTTATTCTTTACGACCGATGAATGGAATTTTCCGATGGGCTTTGCAAATATGGAATTTCTATATCTTCAGG
TTCTTTCAATTTCCAAGTGTTTCTATATGTTTCCGGCTTCCCCAGCTCCACTCGAGTTGTCCCCAACTTATCTCGATCCGAGTACCGCTTCCATTGATAGTTACCACAAT
GTCGTCTCTTGCAAAACCTGCAACAGGAAAATGAGAGAAATGAGAGAGAGAGAGAGAAAGAGAAACAATGGATGGATGGATGGACGGACGGATGGATGGACGGACGGACC
TGGGAGTTTGGCAGTGAGAAGGAACATGGAATTGGTTTCATCAGAGAAGAAAGAATGA
Protein sequenceShow/hide protein sequence
MLRLLQITEHLQSWLQQCVMLWTMHEYNKQKEEESASAYVESDALLLEDSLFFTTDEWNFPMGFANMEFLYLQVLSISKCFYMFPASPAPLELSPTYLDPSTASIDSYHN
VVSCKTCNRKMREMRERERKRNNGWMDGRTDGWTDGPGSLAVRRNMELVSSEKKE