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Carg27788 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27788
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMitotic-spindle organizing protein 1
Genome locationCarg_Chr01:6277038..6277271
RNA-Seq ExpressionCarg27788
SyntenyCarg27788
Gene Ontology termsGO:0033566 - gamma-tubulin complex localization (biological process)
GO:0051415 - microtubule nucleation by interphase microtubule organizing center (biological process)
GO:0090307 - mitotic spindle assembly (biological process)
GO:0000931 - gamma-tubulin large complex (cellular component)
GO:0005819 - spindle (cellular component)
GO:0031021 - interphase microtubule organizing center (cellular component)
InterPro domainsIPR022214 - Mitotic-spindle organizing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649034.1 mitotic-spindle organizing protein 1A [Cucumis sativus]1.0e-2385.51Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN
        MD EAARTARESLDLAFH+SN+L+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR+EPPSS+ I+S N
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN

XP_022151721.1 mitotic-spindle organizing protein 1B [Momordica charantia]8.6e-2686.67Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTR
        MDPEAARTARESLDLAFH+SNILNTGIDRHTLS+LIALCDMGVNPEALAAVVKELR+EPPS E IIS    S+TR
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTR

XP_022932035.1 mitotic-spindle organizing protein 1B-like [Cucurbita moschata]2.1e-32100Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT
        MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT

XP_022972900.1 mitotic-spindle organizing protein 1B-like [Cucurbita maxima]3.0e-3197.4Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT
        MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN+ SLTRPT
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT

XP_038889535.1 mitotic-spindle organizing protein 1B [Benincasa hispida]7.2e-2586.96Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN
        MDPEAARTARESLDLAFH+SN+L+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR+EPPSSE ++S N
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN

TrEMBL top hitse value%identityAlignment
A0A0A0LMZ6 Uncharacterized protein5.1e-2485.51Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN
        MD EAARTARESLDLAFH+SN+L+ GIDRHTLSVLIALCDMGVNPEALAAVVKELR+EPPSS+ I+S N
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN

A0A5D3D1N9 Mitotic-spindle organizing protein 1A-like5.1e-2484.72Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTS
        MD EAARTARESLDLAFH+SN+L+ GIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPP+SE IIS +  S
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTS

A0A6J1DE95 mitotic-spindle organizing protein 1B4.1e-2686.67Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTR
        MDPEAARTARESLDLAFH+SNILNTGIDRHTLS+LIALCDMGVNPEALAAVVKELR+EPPS E IIS    S+TR
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTR

A0A6J1F133 mitotic-spindle organizing protein 1B-like1.0e-32100Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT
        MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT

A0A6J1I9X9 mitotic-spindle organizing protein 1B-like1.5e-3197.4Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT
        MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKN+ SLTRPT
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT

SwissProt top hitse value%identityAlignment
A9NKD9 Mitotic-spindle organizing protein 15.2e-1879.31Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQE
        MD  AA+ ARESLDLAF ISN L TG+DRHTLS+LIALC+ GVNPEALAAVVKELR+E
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQE

B5FXZ4 Mitotic-spindle organizing protein 13.1e-1052.73Show/hide
Query:  RESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEA
        RE++D+ F IS ILNTG+D  TLS+ + LC+ G+NPEAL++V+KELR+   + +A
Subjt:  RESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEA

Q8BUR9 Mitotic-spindle organizing protein 15.2e-1046.67Show/hide
Query:  PEAARTA-----RESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTS
        P AA +A     RE++D+   IS ILNTG+D  TLS+ + LC+ G+NPEAL++V+KELR+    +EA+ +   TS
Subjt:  PEAARTA-----RESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTS

Q9C9T3 Mitotic-spindle organizing protein 1A2.6e-1765.15Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAII
        M+ EAA TARESL+L F +SNIL TG+DRHTLSVLIALCD+G+NPEALA +VKELR++  ++   +
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAII

Q9M0N8 Mitotic-spindle organizing protein 1B1.6e-1981.03Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQE
        MD EA+RTARESL+L F +SNIL+TG+DRHTLSVLIALCD+GVNPEALA VVKELR+E
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQE

Arabidopsis top hitse value%identityAlignment
AT1G73790.1 Protein of unknown function (DUF3743)1.8e-1865.15Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAII
        M+ EAA TARESL+L F +SNIL TG+DRHTLSVLIALCD+G+NPEALA +VKELR++  ++   +
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAII

AT4G09550.1 AtGCP3 interacting protein 11.2e-2081.03Show/hide
Query:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQE
        MD EA+RTARESL+L F +SNIL+TG+DRHTLSVLIALCD+GVNPEALA VVKELR+E
Subjt:  MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAGAGGCTGCACGAACTGCTCGGGAATCGCTAGATCTTGCCTTTCATATTTCCAACATACTCAATACTGGAATTGATCGCCACACCCTCTCCGTCCTTATTGC
TCTCTGTGACATGGGAGTGAACCCGGAGGCTCTAGCTGCTGTTGTCAAGGAACTACGTCAAGAGCCACCTTCATCGGAGGCCATCATCTCCAAGAACACGACATCACTTA
CCCGACCAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAGAGGCTGCACGAACTGCTCGGGAATCGCTAGATCTTGCCTTTCATATTTCCAACATACTCAATACTGGAATTGATCGCCACACCCTCTCCGTCCTTATTGC
TCTCTGTGACATGGGAGTGAACCCGGAGGCTCTAGCTGCTGTTGTCAAGGAACTACGTCAAGAGCCACCTTCATCGGAGGCCATCATCTCCAAGAACACGACATCACTTA
CCCGACCAACGTAA
Protein sequenceShow/hide protein sequence
MDPEAARTARESLDLAFHISNILNTGIDRHTLSVLIALCDMGVNPEALAAVVKELRQEPPSSEAIISKNTTSLTRPT