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Carg27830 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27830
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMitochondrial pyruvate carrier
Genome locationCarg_Chr18:4587785..4591593
RNA-Seq ExpressionCarg27830
SyntenyCarg27830
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005336 - Mitochondrial pyruvate carrier


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012632.1 Mitochondrial pyruvate carrier 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-44100Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

XP_022925307.1 mitochondrial pyruvate carrier 4-like [Cucurbita moschata]1.6e-44100Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

XP_022927623.1 mitochondrial pyruvate carrier 4 [Cucurbita moschata]3.1e-4395.51Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV E
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

XP_022994927.1 mitochondrial pyruvate carrier 4 [Cucurbita maxima]2.1e-4498.88Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAA+EE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

XP_038894595.1 mitochondrial pyruvate carrier 4 isoform X2 [Benincasa hispida]4.0e-4394.38Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IWSRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVAA +E
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

TrEMBL top hitse value%identityAlignment
A0A1S3C939 Mitochondrial pyruvate carrier1.9e-4394.38Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEK+SYPQQIAVTATG+IWSRYSTVITPKNWNLFSVN+AMAGTGIYQLTRKIQHDYFSKEEVAA +E
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

A0A6J1EBD9 Mitochondrial pyruvate carrier7.9e-45100Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

A0A6J1ELI4 Mitochondrial pyruvate carrier1.5e-4395.51Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV E
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

A0A6J1JXA3 Mitochondrial pyruvate carrier1.0e-4498.88Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAA+EE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

A0A6J1KR30 Mitochondrial pyruvate carrier4.3e-4394.38Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADF+KPPEK+SYPQQIAVTATG+IWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAV +
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

SwissProt top hitse value%identityAlignment
O49636 Mitochondrial pyruvate carrier 41.6e-3983.15Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IWSRYS VI PKNWNLFSVNVAMAGTGIYQL RKI+HDY ++ E A   E
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE

O95563 Mitochondrial pyruvate carrier 23.9e-1754.93Show/hide
Query:  FWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTR
        FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IWSRYS VI PKNW+LF+VN  +   G  QL R
Subjt:  FWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTR

Q8L7H8 Mitochondrial pyruvate carrier 22.9e-3681.82Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE
        HFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E AAVE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE

Q8LD38 Mitochondrial pyruvate carrier 32.9e-3684.62Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY
        HFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++WSRYSTVITPKNWNLFSV++ MA TGIYQLTRKI+HDY
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY

Q9D023 Mitochondrial pyruvate carrier 23.9e-1754.93Show/hide
Query:  FWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTR
        FWAP  KWG+  A +AD ++P EKLS  Q   + ATG IWSRYS VI PKNW+LF+VN  +   G  QL R
Subjt:  FWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTR

Arabidopsis top hitse value%identityAlignment
AT4G05590.1 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336)2.0e-3784.62Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY
        HFWAPTFKWGISIANIADF KPPE LSYPQQI +T TG++WSRYSTVITPKNWNLFSV++ MA TGIYQLTRKI+HDY
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDY

AT4G05590.2 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336)9.9e-3256.9Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQI--------------------------------------AVTATGIIWSRYSTVITPKNWNLFSVNVAM
        HFWAPTFKWGISIANIADF KPPE LSYPQQI                                       +T TG++WSRYSTVITPKNWNLFSV++ M
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQI--------------------------------------AVTATGIIWSRYSTVITPKNWNLFSVNVAM

Query:  AGTGIYQLTRKIQHDY
        A TGIYQLTRKI+HDY
Subjt:  AGTGIYQLTRKIQHDY

AT4G14695.1 Uncharacterised protein family (UPF0041)2.0e-3781.82Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE
        HFWAPTFKWGISIANIADF KPPE +SY QQIAVT TG+IW R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E AAVE
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE

AT4G14695.2 Uncharacterised protein family (UPF0041)1.8e-2568.75Show/hide
Query:  WGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE
        W        +F KPPE +SY QQIAVT TG+IW R ST+ITPKNWNLFSVNVAMA TGIYQLTRKI++DY S+ E AAVE
Subjt:  WGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVE

AT4G22310.1 Uncharacterised protein family (UPF0041)1.2e-4083.15Show/hide
Query:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE
        HFWAPTFKWGISIANIADF+KPPEKLSYPQQIAVT TG+IWSRYS VI PKNWNLFSVNVAMAGTGIYQL RKI+HDY ++ E A   E
Subjt:  HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCTAC
TGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAA
TACAGCACGATTATTTCTCCAAGGAGGAAGTGGCTGCTGTCGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
CACTTCTGGGCACCAACCTTTAAGTGGGGTATCAGTATAGCCAATATTGCTGACTTCTCTAAGCCACCAGAAAAACTTTCTTATCCTCAGCAAATAGCTGTTACAGCTAC
TGGAATTATCTGGTCACGTTACAGCACCGTGATCACACCGAAGAACTGGAACCTTTTTAGCGTCAATGTTGCAATGGCAGGGACTGGCATCTACCAATTGACAAGAAAAA
TACAGCACGATTATTTCTCCAAGGAGGAAGTGGCTGCTGTCGAAGAATGATGACCAAATATTACATTATTTGCCTCTGTGATCACCTGAATTTCCCTTACATCCATGTGT
TGCCCCCCCTCCCAAATCTTACCTAACAAAAGCTCCATGAATTTCTTTTTTTTATTACGAATCGATTCTTATCCTTTATTTTACTTTTGTAGCCACGAAACTAAGCTTGA
AACTGTTTGGAAAAATAAAC
Protein sequenceShow/hide protein sequence
HFWAPTFKWGISIANIADFSKPPEKLSYPQQIAVTATGIIWSRYSTVITPKNWNLFSVNVAMAGTGIYQLTRKIQHDYFSKEEVAAVEE