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Carg27841 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27841
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase
Genome locationCarg_Chr20:10797832..10798350
RNA-Seq ExpressionCarg27841
SyntenyCarg27841
Gene Ontology termsGO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR028889 - Ubiquitin specific protease domain
IPR038765 - Papain-like cysteine peptidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571374.1 Ubiquitin carboxyl-terminal hydrolase 27, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2253.79Show/hide
Query:  MLNYINGLTGEDDYPTNLA--------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDATLQDVS
        MLNYINGLTGEDDYPTNLA                                                  SVVQH    G      YRRVQDSDA LQDVS
Subjt:  MLNYINGLTGEDDYPTNLA--------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDATLQDVS

Query:  TEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        TEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
Subjt:  TEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

KAG7011143.1 Ubiquitin carboxyl-terminal hydrolase 27, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-37100Show/hide
Query:  MLNYINGLTGEDDYPTNLASVVQHSVEPGVAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        MLNYINGLTGEDDYPTNLASVVQHSVEPGVAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
Subjt:  MLNYINGLTGEDDYPTNLASVVQHSVEPGVAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

XP_022928102.1 ubiquitin carboxyl-terminal hydrolase 27 [Cucurbita moschata]2.3e-2151.45Show/hide
Query:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA
        MLNYINGLTGEDDYPTNLA                                                        SVVQH    G      YRRVQDSDA
Subjt:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA

Query:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
         LQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
Subjt:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

XP_022971724.1 ubiquitin carboxyl-terminal hydrolase 27 [Cucurbita maxima]1.2e-2050Show/hide
Query:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA
        MLNYINGLTGEDDYPTNLA                                                        SVVQH    G      YRRVQDSD 
Subjt:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA

Query:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
         LQDVSTEWFHVSDSEVHLVSEEEV+AAEATLLFYEKI
Subjt:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

XP_023513383.1 ubiquitin carboxyl-terminal hydrolase 27 [Cucurbita pepo subsp. pepo]1.0e-2153.03Show/hide
Query:  MLNYINGLTGEDDYPTNLA--------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDATLQDVS
        MLNYINGLTGEDDYPTNLA                                                  SVVQH    G      YRRVQDSDA LQDVS
Subjt:  MLNYINGLTGEDDYPTNLA--------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDATLQDVS

Query:  TEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        TEWFHVSDSEVHLVSEEEVLAAEATLLFYE+I
Subjt:  TEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

TrEMBL top hitse value%identityAlignment
A0A0A0LJP9 USP domain-containing protein9.2e-1643.15Show/hide
Query:  MLNYINGLTGEDDYPTNL----------------------------------------------------------ASVVQHSVEPGVAITPFYRRV---
        ML YINGLTGED++P NL                                                           SVVQH  +PG      YRRV   
Subjt:  MLNYINGLTGEDDYPTNL----------------------------------------------------------ASVVQHSVEPGVAITPFYRRV---

Query:  ---QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
           QD D   QDVSTEWFHVSDSEVHLVSEEEVLAAEAT+LFYEKI
Subjt:  ---QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

A0A1S3C667 ubiquitin carboxyl-terminal hydrolase 271.7e-1442.76Show/hide
Query:  MLNYINGLTGEDDYP---------------------------------TN------------------------LASVVQHSVEPGVAITPFYRRV----
        ML YINGLTGED++P                                 TN                        + SVVQH  +PG      YRRV    
Subjt:  MLNYINGLTGEDDYP---------------------------------TN------------------------LASVVQHSVEPGVAITPFYRRV----

Query:  --QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
          QD D   Q+VSTEWFHVSDSEVHLVSEEEVLAAEAT+LFYEKI
Subjt:  --QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

A0A5A7TSR6 Ubiquitin carboxyl-terminal hydrolase 271.7e-1442.76Show/hide
Query:  MLNYINGLTGEDDYP---------------------------------TN------------------------LASVVQHSVEPGVAITPFYRRV----
        ML YINGLTGED++P                                 TN                        + SVVQH  +PG      YRRV    
Subjt:  MLNYINGLTGEDDYP---------------------------------TN------------------------LASVVQHSVEPGVAITPFYRRV----

Query:  --QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
          QD D   Q+VSTEWFHVSDSEVHLVSEEEVLAAEAT+LFYEKI
Subjt:  --QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

A0A6J1EIY6 ubiquitin carboxyl-terminal hydrolase 271.1e-2151.45Show/hide
Query:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA
        MLNYINGLTGEDDYPTNLA                                                        SVVQH    G      YRRVQDSDA
Subjt:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA

Query:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
         LQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
Subjt:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

A0A6J1I9D4 ubiquitin carboxyl-terminal hydrolase 275.6e-2150Show/hide
Query:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA
        MLNYINGLTGEDDYPTNLA                                                        SVVQH    G      YRRVQDSD 
Subjt:  MLNYINGLTGEDDYPTNLA--------------------------------------------------------SVVQHSVEPGVAITPFYRRVQDSDA

Query:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
         LQDVSTEWFHVSDSEVHLVSEEEV+AAEATLLFYEKI
Subjt:  TLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

SwissProt top hitse value%identityAlignment
Q8W4N3 Ubiquitin carboxyl-terminal hydrolase 25.4e-0542.31Show/hide
Query:  TGEDDYPTNLASVVQHS--VEPG--VAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        +GED     LA +V+HS  +  G  VA     +RV+++D++    ST W++VSD+ V  VS E+VL +EA +LFYE+I
Subjt:  TGEDDYPTNLASVVQHS--VEPG--VAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

Q9FPS0 Ubiquitin carboxyl-terminal hydrolase 271.4e-0543.48Show/hide
Query:  LASVVQHSVEPGVAITPFYRRV----QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        L +VV+H    G      YR V    Q+ +    D    WF +SDSEV  VSE +VL AEA+LLFYE++
Subjt:  LASVVQHSVEPGVAITPFYRRV----QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

Q9FPT5 Ubiquitin carboxyl-terminal hydrolase 11.6e-0437.65Show/hide
Query:  YINGLTGEDDYPT-NLASVVQH--SVEPGVAITPF---YRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        Y++    E+D P   LA +V+H  ++  G  ++     ++  +DSD T +  S+ W+H SDS+V   S EEVL +EA +LFYE+I
Subjt:  YINGLTGEDDYPT-NLASVVQH--SVEPGVAITPF---YRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

Arabidopsis top hitse value%identityAlignment
AT1G04860.1 ubiquitin-specific protease 23.8e-0642.31Show/hide
Query:  TGEDDYPTNLASVVQHS--VEPG--VAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        +GED     LA +V+HS  +  G  VA     +RV+++D++    ST W++VSD+ V  VS E+VL +EA +LFYE+I
Subjt:  TGEDDYPTNLASVVQHS--VEPG--VAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

AT2G32780.1 ubiquitin-specific protease 11.1e-0537.65Show/hide
Query:  YINGLTGEDDYPT-NLASVVQH--SVEPGVAITPF---YRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        Y++    E+D P   LA +V+H  ++  G  ++     ++  +DSD T +  S+ W+H SDS+V   S EEVL +EA +LFYE+I
Subjt:  YINGLTGEDDYPT-NLASVVQH--SVEPGVAITPF---YRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

AT4G39370.1 ubiquitin-specific protease 271.0e-0643.48Show/hide
Query:  LASVVQHSVEPGVAITPFYRRV----QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        L +VV+H    G      YR V    Q+ +    D    WF +SDSEV  VSE +VL AEA+LLFYE++
Subjt:  LASVVQHSVEPGVAITPFYRRV----QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI

AT4G39370.3 ubiquitin-specific protease 271.0e-0643.48Show/hide
Query:  LASVVQHSVEPGVAITPFYRRV----QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI
        L +VV+H    G      YR V    Q+ +    D    WF +SDSEV  VSE +VL AEA+LLFYE++
Subjt:  LASVVQHSVEPGVAITPFYRRV----QDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAATTACATAAACGGACTAACAGGAGAGGACGACTACCCTACGAATCTCGCCTCAGTTGTTCAGCATTCGGTAGAGCCGGGGGTGGCCATTACACCGTTTTACCG
AAGAGTTCAAGATAGCGACGCAACGTTGCAGGATGTCTCTACAGAATGGTTTCATGTATCAGATTCAGAAGTTCATCTTGTTTCTGAAGAAGAAGTTCTTGCAGCTGAAG
CTACCTTGCTGTTCTATGAGAAAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAATTACATAAACGGACTAACAGGAGAGGACGACTACCCTACGAATCTCGCCTCAGTTGTTCAGCATTCGGTAGAGCCGGGGGTGGCCATTACACCGTTTTACCG
AAGAGTTCAAGATAGCGACGCAACGTTGCAGGATGTCTCTACAGAATGGTTTCATGTATCAGATTCAGAAGTTCATCTTGTTTCTGAAGAAGAAGTTCTTGCAGCTGAAG
CTACCTTGCTGTTCTATGAGAAAATCTAG
Protein sequenceShow/hide protein sequence
MLNYINGLTGEDDYPTNLASVVQHSVEPGVAITPFYRRVQDSDATLQDVSTEWFHVSDSEVHLVSEEEVLAAEATLLFYEKI