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Carg27853 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27853
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTranslocase subunit seca
Genome locationCarg_Chr15:6255119..6255664
RNA-Seq ExpressionCarg27853
SyntenyCarg27853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579280.1 hypothetical protein SDJN03_23728, partial [Cucurbita argyrosperma subsp. sororia]4.4e-85100Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
        MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK

Query:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

KAG7016791.1 hypothetical protein SDJN02_21901, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-85100Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
        MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK

Query:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

XP_022939182.1 uncharacterized protein LOC111445178 [Cucurbita moschata]1.3e-8499.37Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
        MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPP+RVANPLIQDDRFGDEKPK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK

Query:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

XP_022973561.1 uncharacterized protein LOC111472100 [Cucurbita maxima]7.3e-8094.38Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVD--ERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEK
        MNKMVVQHNA SVHDDMLNASAVD  +RLVCPKPRRL  INVRPFQSDALELLFLKGGCGL+SFNSSGTELASSPPFFCGSPP+RVANPLIQDDRFGDEK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVD--ERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEK

Query:  PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        PKVFPLFS APPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

XP_023545156.1 uncharacterized protein LOC111804540 [Cucurbita pepo subsp. pepo]4.9e-8498.1Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
        MNKMVVQHNAFSVHDDMLNASA+DERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPP+RVANPLIQDDRFGDEKPK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK

Query:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        VFP+FSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein3.7e-5375.35Show/hide
Query:  ERLVCPKPRRLGSIN--------VRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSPP
        ER+VCPKPRRLG IN           F SDAL+LLFLKGGCGLE+FNSS  +LASSPP+FCGSPP+RVANPLIQD RFGDEKPK+ PLFS A   P SPP
Subjt:  ERLVCPKPRRLGSIN--------VRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSPP

Query:  PSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        PS GR GGCVRVNFG NPAVRIEGF+CRLDRERRNRS+ ALA
Subjt:  PSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

A0A1S3CR46 uncharacterized protein LOC1035033851.3e-5372.19Show/hide
Query:  LNASAVD--ERLVCPKPRRLGSIN--------VRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSS
        + ++A D  ER+VCPKPRRLG IN           F SDA++LLFLKGGCGLE FNSS T+LASS P+FCGSPP+RVANPLIQD RFGDEKPK+ PLFS+
Subjt:  LNASAVD--ERLVCPKPRRLGSIN--------VRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSS

Query:  APPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        A   P SPPPS GR GGCVRVNFGNNPAVRIEGF+CRLDRERRNRS+ ALA
Subjt:  APPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

A0A5D3C147 Uncharacterized protein1.3e-5372.19Show/hide
Query:  LNASAVD--ERLVCPKPRRLGSIN--------VRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSS
        + ++A D  ER+VCPKPRRLG IN           F SDA++LLFLKGGCGLE FNSS T+LASS P+FCGSPP+RVANPLIQD RFGDEKPK+ PLFS+
Subjt:  LNASAVD--ERLVCPKPRRLGSIN--------VRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSS

Query:  APPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        A   P SPPPS GR GGCVRVNFGNNPAVRIEGF+CRLDRERRNRS+ ALA
Subjt:  APPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

A0A6J1FG33 uncharacterized protein LOC1114451786.2e-8599.37Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK
        MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPP+RVANPLIQDDRFGDEKPK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPK

Query:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  VFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

A0A6J1I8Z5 uncharacterized protein LOC1114721003.5e-8094.38Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVD--ERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEK
        MNKMVVQHNA SVHDDMLNASAVD  +RLVCPKPRRL  INVRPFQSDALELLFLKGGCGL+SFNSSGTELASSPPFFCGSPP+RVANPLIQDDRFGDEK
Subjt:  MNKMVVQHNAFSVHDDMLNASAVD--ERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEK

Query:  PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        PKVFPLFS APPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
Subjt:  PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein8.7e-2337.97Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDER---LVCPKPRRLGSINVRPFQ------------------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGS
        MN   +Q NAF   ++M   +AV +R   ++CPKPRR+G++N    +                  S+ L+ +  KGG G    + + T + + P FF GS
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDER---LVCPKPRRLGSINVRPFQ------------------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGS

Query:  PPTRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSP------PPSTGRTGGCV--RVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        PP+RV+NPL +D  F +E      L   A PSPS+P      PPS+ R G CV    +FGNNP VR+ GF+C  DR   NRS++ LA
Subjt:  PPTRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSP------PPSTGRTGGCV--RVNFGNNPAVRIEGFECRLDRERRNRSVAALA

AT1G13390.2 unknown protein8.7e-2337.97Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDER---LVCPKPRRLGSINVRPFQ------------------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGS
        MN   +Q NAF   ++M   +AV +R   ++CPKPRR+G++N    +                  S+ L+ +  KGG G    + + T + + P FF GS
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDER---LVCPKPRRLGSINVRPFQ------------------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGS

Query:  PPTRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSP------PPSTGRTGGCV--RVNFGNNPAVRIEGFECRLDRERRNRSVAALA
        PP+RV+NPL +D  F +E      L   A PSPS+P      PPS+ R G CV    +FGNNP VR+ GF+C  DR   NRS++ LA
Subjt:  PPTRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSP------PPSTGRTGGCV--RVNFGNNPAVRIEGFECRLDRERRNRSVAALA

AT1G68490.1 unknown protein1.1e-2845.45Show/hide
Query:  MNKMVVQHNAFSVHDDMLNAS-AVDER----LVCPKPRRLG--------SINVRPF------------QSDALELLFLKGGCGLESFNSSGTELASSPPF
        MN   VQ NAF+   D+ ++S +V ER    +VCPKPRR+G        S ++R +            ++D L+++  K G G E  N     + S  PF
Subjt:  MNKMVVQHNAFSVHDDMLNAS-AVDER----LVCPKPRRLG--------SINVRPF------------QSDALELLFLKGGCGLESFNSSGTELASSPPF

Query:  FCGSPPTRVANPLIQDDRFGDE---KPKVFPLFSSAPPSPSSPPPSTGRTGGC-VRVNFGNNPAVRIEGFECRLDRERRNRSVAALA
         CGSPP+RVANPL QD RF DE      V P     PPS SSP  S+GR GGC VR NFGN+P VR+EGF+C LDR+ RN S+ ALA
Subjt:  FCGSPPTRVANPLIQDDRFGDE---KPKVFPLFSSAPPSPSSPPPSTGRTGGC-VRVNFGNNPAVRIEGFECRLDRERRNRSVAALA

AT3G02555.1 unknown protein1.6e-2142.11Show/hide
Query:  MNKMVVQHNAFSVHDDM-----LNASAVDERLVCPKPRRLGSINVRPFQ-----SDALELLFLKGGCG-LESFNSSGTELASSPPFFCGSPPTRVANPLI
        MN   +Q NAF   ++      + +  VD  +VCPKPRR  ++ +RPF+     S A ++   K G   L+ F    +  + SPPFF GSPP+R ANPL 
Subjt:  MNKMVVQHNAFSVHDDM-----LNASAVDERLVCPKPRRLGSINVRPFQ-----SDALELLFLKGGCG-LESFNSSGTELASSPPFFCGSPPTRVANPLI

Query:  QDDRFGDEKPKVFPLFSSAPPSPSSPPPSTGRT-GGCVRVNFGNNPA-VRIEGFECRLDRERRNRSVAALA
        QD RFGDEK       ++  PS S   PS  R   GC R+ FG  PA VR+EGF+C L+R+R N S+ A+A
Subjt:  QDDRFGDEKPKVFPLFSSAPPSPSSPPPSTGRT-GGCVRVNFGNNPA-VRIEGFECRLDRERRNRSVAALA

AT5G16110.1 unknown protein1.9e-2542.54Show/hide
Query:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSIN---VRPFQ----SDALELLFLKGGCGL-------ESFNSSGTELASSPPFFCGSPPTRVAN
        MN   +Q NAF   ++M+     D  +VCPKPRR+G +    +RP +      A +L   K G  L       E   + G  L+SSPP+F GSPP+R AN
Subjt:  MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSIN---VRPFQ----SDALELLFLKGGCGL-------ESFNSSGTELASSPPFFCGSPPTRVAN

Query:  PLIQDDRFGDEK--------PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFG-NNPAVRIEGFECRLDRERRNRSVAALA
        PL QD RF DEK        P + P  ++  PSPSS   S+  + GCVR+ FG N+PAVR+EGF+C L+R+R+N S+ A+A
Subjt:  PLIQDDRFGDEK--------PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFG-NNPAVRIEGFECRLDRERRNRSVAALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGATGGTGGTTCAACACAACGCTTTTTCAGTTCATGACGACATGCTCAACGCCTCCGCCGTCGACGAACGACTGGTTTGCCCAAAACCCCGCCGTCTCGGTTC
CATCAACGTCCGCCCTTTTCAATCAGATGCTTTGGAACTCCTCTTCTTAAAGGGTGGTTGTGGATTGGAGAGTTTTAACAGTAGTGGTACAGAATTAGCCTCGTCGCCGC
CGTTTTTTTGTGGGTCGCCGCCGACCAGAGTAGCTAACCCATTAATCCAAGACGATCGATTTGGGGATGAGAAGCCGAAGGTGTTTCCCCTCTTCTCGTCAGCGCCTCCT
TCTCCGTCATCGCCTCCGCCGTCAACTGGTCGGACAGGCGGATGTGTTCGGGTTAATTTTGGAAACAACCCGGCGGTGAGAATTGAGGGGTTTGAATGCCGGCTCGATAG
GGAGAGGCGAAACCGCAGCGTTGCTGCTCTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGATGGTGGTTCAACACAACGCTTTTTCAGTTCATGACGACATGCTCAACGCCTCCGCCGTCGACGAACGACTGGTTTGCCCAAAACCCCGCCGTCTCGGTTC
CATCAACGTCCGCCCTTTTCAATCAGATGCTTTGGAACTCCTCTTCTTAAAGGGTGGTTGTGGATTGGAGAGTTTTAACAGTAGTGGTACAGAATTAGCCTCGTCGCCGC
CGTTTTTTTGTGGGTCGCCGCCGACCAGAGTAGCTAACCCATTAATCCAAGACGATCGATTTGGGGATGAGAAGCCGAAGGTGTTTCCCCTCTTCTCGTCAGCGCCTCCT
TCTCCGTCATCGCCTCCGCCGTCAACTGGTCGGACAGGCGGATGTGTTCGGGTTAATTTTGGAAACAACCCGGCGGTGAGAATTGAGGGGTTTGAATGCCGGCTCGATAG
GGAGAGGCGAAACCGCAGCGTTGCTGCTCTGGCTTAG
Protein sequenceShow/hide protein sequence
MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSINVRPFQSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPTRVANPLIQDDRFGDEKPKVFPLFSSAPP
SPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNRSVAALA