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Carg27855 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27855
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 27
Genome locationCarg_Chr15:6225769..6226056
RNA-Seq ExpressionCarg27855
SyntenyCarg27855
Gene Ontology termsNA
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063931.1 putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]2.4e-1757.89Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        M   GAT P RRRR LS FF+++FFIWVV       A+A+ARP   ++ P+    G  GSKEK    YFNGRS GSR F+E KRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

KAB1221059.1 CLAVATA3/ESR (CLE)-related protein 43 [Morella rubra]6.9e-0951.9Show/hide
Query:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        IWV  C +  QA A+ R  PGN + + +  G  GS     KE+LLR YFNGR+FG    + GF+E KR VPSCPDPLHN
Subjt:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

KAG6579278.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]8.9e-49100Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

KAG6601785.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1958.7Show/hide
Query:  GATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQS-VSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        G   P R+RRFLS+  ++  FIWVVFCH        AR FP N  PE++ V GG GSKEKLLR YFN    G RGF++ KRTVPSCPDPLHN
Subjt:  GATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQS-VSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

KAG7016789.1 hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-49100Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

TrEMBL top hitse value%identityAlignment
A0A061E6F8 Clavata3/esr-related 43, putative1.3e-0545.78Show/hide
Query:  LLIFFIWV-VFCHHRHQATAVARPFPGNQKPEQSVSGGA---GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        L+IFF+ + V C  R       R  PGN   + + S G      K  L + YFNGRSF      RGF+E KR VPSCPDPLHN
Subjt:  LLIFFIWV-VFCHHRHQATAVARPFPGNQKPEQSVSGGA---GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

A0A0A0KR66 Uncharacterized protein1.8e-0741.3Show/hide
Query:  SSFFLLIFFIWV----VFCHHRHQATAVARPFPGNQKP---EQSVSGGA--GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        S+F +LI  +WV    V CH + +A+ +  P P    P   ++S+SG     +K  LL+ YFNGR+F       GF++ KR +PSCPDPLHN
Subjt:  SSFFLLIFFIWV----VFCHHRHQATAVARPFPGNQKP---EQSVSGGA--GSKEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

A0A2N9G6I6 Uncharacterized protein7.7e-0645.78Show/hide
Query:  IFFIWVVFCHHRHQATAVARPFPGNQK----PEQSVSGGAGSKEKLLRTYFNGRSFG------SRGFQEKKRTVPSCPDPLHN
        +F IW+  C +  QA A+ R FPGN       E+S+     SKE+L   YF+GR+F         GF E KR VPSCPDPLHN
Subjt:  IFFIWVVFCHHRHQATAVARPFPGNQK----PEQSVSGGAGSKEKLLRTYFNGRSFG------SRGFQEKKRTVPSCPDPLHN

A0A5A7VDX3 Putative Clavata3/esr-related 431.1e-1757.89Show/hide
Query:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN
        M   GAT P RRRR LS FF+++FFIWVV       A+A+ARP   ++ P+    G  GSKEK    YFNGRS GSR F+E KRTVPSCPDPLHN
Subjt:  MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN

A0A6A1W705 CLAVATA3/ESR (CLE)-related protein 433.3e-0951.9Show/hide
Query:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN
        IWV  C +  QA A+ R  PGN + + +  G  GS     KE+LLR YFNGR+FG    + GF+E KR VPSCPDPLHN
Subjt:  IWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGS-----KEKLLRTYFNGRSFG----SRGFQEKKRTVPSCPDPLHN

SwissProt top hitse value%identityAlignment
Q9LUA1 CLAVATA3/ESR (CLE)-related protein 276.9e-0433.33Show/hide
Query:  LLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN
        +L+ ++  +FC   +      R FP      ++ + G   +E L++ YF         SF  +G  E KR VPSCPDPLHN
Subjt:  LLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT3G25905.1 CLAVATA3/ESR-RELATED 274.9e-0533.33Show/hide
Query:  LLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN
        +L+ ++  +FC   +      R FP      ++ + G   +E L++ YF         SF  +G  E KR VPSCPDPLHN
Subjt:  LLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNG------RSFGSRGFQEKKRTVPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTACTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGC
CACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTT
TCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGCGGAGGCGCCACTCCACCTCGACGGCGGCGGCGTTTTCTCTCTTCTTTCTTCCTACTGATTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGTCACCAAGC
CACCGCCGTCGCCAGACCGTTCCCTGGAAATCAAAAGCCAGAGCAAAGCGTTAGCGGTGGCGCCGGAAGCAAAGAGAAGCTGCTCCGGACGTATTTCAATGGAAGGAGTT
TCGGTTCGAGAGGGTTTCAAGAGAAGAAACGAACAGTCCCCAGCTGCCCTGATCCTCTCCATAACTAG
Protein sequenceShow/hide protein sequence
MSGGGATPPRRRRRFLSSFFLLIFFIWVVFCHHRHQATAVARPFPGNQKPEQSVSGGAGSKEKLLRTYFNGRSFGSRGFQEKKRTVPSCPDPLHN