; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27861 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27861
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein of unknown function (DUF3511)
Genome locationCarg_Chr01:6457497..6457760
RNA-Seq ExpressionCarg27861
SyntenyCarg27861
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]2.4e-3287.36Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

KAG6607585.1 hypothetical protein SDJN03_00927, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3898.85Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK KTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

KAG7037209.1 hypothetical protein SDJN02_00832, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-38100Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]1.8e-3287.36Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]1.3e-3083.91Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSS SGEF F+T+SNSYNFNG   K +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein8.8e-3387.36Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 81.2e-3287.36Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSSTSGEFGF+T+SNSYNFNG   K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366836.3e-3183.91Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSS SGEF F+T+SNSYNFNG   K +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726833.5e-2981.61Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FPKYSSS SGEF F+T+SNSYNFNG     +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RY L
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

A0A6N2KPE9 Uncharacterized protein1.1e-2774.71Show/hide
Query:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        MEK K+FP+YSSS SGEFGFE QS+SYNFNG  +KG+GFS+S+DPEL+RK+RIASYNVF ME K+KSS +NSFKWIK+KFSD RYG+
Subjt:  MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)1.1e-0841.46Show/hide
Query:  YSSSTSGEFGFET----QSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL
        YS+ST   +   T     SN+ +   +  K  GF    + E+QRK+R+ASYNV+ +E +VK S+K SFKW K   S+  YGL
Subjt:  YSSSTSGEFGFET----QSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL

AT2G19460.1 Protein of unknown function (DUF3511)1.8e-0650Show/hide
Query:  EKGSGFSSSA----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK
        +KG   SSS+    DP+LQRK+R+ SY  + +E K+K S + SFKWIK K
Subjt:  EKGSGFSSSA----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK

AT3G13910.1 Protein of unknown function (DUF3511)3.4e-0537.33Show/hide
Query:  SSSTSGEFGFETQSNSYNFN-------GSAEKGSGFS-SSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIK
        S S     G ++Q+N Y           +A++ +  S S +DPE +RKRR+A Y V+++E K+K S++ SFKW K
Subjt:  SSSTSGEFGFETQSNSYNFN-------GSAEKGSGFS-SSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIK

AT4G09890.1 Protein of unknown function (DUF3511)1.8e-1451.81Show/hide
Query:  MEKRKTFPKYSSS-TSGEFGF-ETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS
        M+  K++ +YSSS ++ EFG+ + +SNSYNFNG          + DPE++RK+R+ASYN+F  E K+KS++KNSFKWIK KFS
Subjt:  MEKRKTFPKYSSS-TSGEFGF-ETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS

AT5G11970.1 Protein of unknown function (DUF3511)3.7e-0737.65Show/hide
Query:  YSSSTSGEF-----GFETQSNSYNFNGSAEKGSGFSSS---ADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYG
        Y  +  G+F      + T+ N+  ++   EK    S S    DPELQRK+R+ASY ++ +E KVK S +NSF+W+K +++   YG
Subjt:  YSSSTSGEF-----GFETQSNSYNFNGSAEKGSGFSSS---ADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGAAAAACATTCCCCAAGTACTCGTCCTCCACTTCGGGCGAGTTCGGTTTCGAAACCCAGTCTAACTCGTACAATTTCAACGGCTCGGCTGAGAAGGGGAG
CGGATTTTCGTCTTCGGCCGATCCCGAGCTTCAAAGGAAGAGAAGGATCGCCTCTTATAATGTTTTCAATATGGAAAACAAAGTGAAGTCCAGTGTAAAGAACAGCTTCA
AATGGATCAAAACCAAGTTTAGTGACCGTCGCTACGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGAAAAACATTCCCCAAGTACTCGTCCTCCACTTCGGGCGAGTTCGGTTTCGAAACCCAGTCTAACTCGTACAATTTCAACGGCTCGGCTGAGAAGGGGAG
CGGATTTTCGTCTTCGGCCGATCCCGAGCTTCAAAGGAAGAGAAGGATCGCCTCTTATAATGTTTTCAATATGGAAAACAAAGTGAAGTCCAGTGTAAAGAACAGCTTCA
AATGGATCAAAACCAAGTTTAGTGACCGTCGCTACGGTTTGTGA
Protein sequenceShow/hide protein sequence
MEKRKTFPKYSSSTSGEFGFETQSNSYNFNGSAEKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDRRYGL