; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27873 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27873
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionacyl-coenzyme A thioesterase 13
Genome locationCarg_Chr20:9706551..9709616
RNA-Seq ExpressionCarg27873
SyntenyCarg27873
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domainsIPR003736 - Phenylacetic acid degradation-related domain
IPR006683 - Thioesterase domain
IPR029069 - HotDog domain superfamily
IPR039298 - Acyl-coenzyme A thioesterase 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571321.1 Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]5.1e-78100Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_022931994.1 acyl-coenzyme A thioesterase 13 [Cucurbita moschata]2.8e-7698.06Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVAS+IDALP RFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDA+VLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_022973825.1 acyl-coenzyme A thioesterase 13 [Cucurbita maxima]3.3e-7798.71Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTD+RVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVAL TLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_023512633.1 acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo]5.3e-7598.06Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKH  DDDRK+ASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_038901620.1 acyl-coenzyme A thioesterase 13 [Benincasa hispida]6.7e-7091.61Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEK KRYLEKH  DDDR VAS IDALPFRFYENF+MT LRVDLI+PGRIVCSLKVPARLLN NNSLHGGASASLVDCIGS ALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEID+KVLR+GKTIAVINVELRRKGNGKIIAQGRHTKYLA SSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

TrEMBL top hitse value%identityAlignment
A0A1S3CCW9 acyl-coenzyme A thioesterase 138.3e-6687.1Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEK  DD     AS ID LPFRFYENF+MT +RVDLI+PGRI+CSLKVPARLLNENNSLHGGASASLVDCIGS ALKTLGA TTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEID+KVLR+GKTIAVINVELRRK NGKIIAQGRHTKYLA SSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A5D3BST3 CCR4-NOT transcription complex subunit 118.3e-6687.1Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEK  DD     AS ID LPFRFYENF+MT +RVDLI+PGRI+CSLKVPARLLNENNSLHGGASASLVDCIGS ALKTLGA TTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEID+KVLR+GKTIAVINVELRRK NGKIIAQGRHTKYLA SSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A6J1E0I3 acyl-coenzyme A thioesterase 13 isoform X11.7e-6682.58Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDD DDR +AS ID LP RFYE FVMT LRVDLIEPGR+VCSLKVPARLLNENNSLHGGA+A+LVDCIGS A+KT G +TTGVS+EIN+S
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        Y+DAAYLDE+IEI++KVLR+GKTIAV+NVELR+K NGKI+AQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A6J1EVT6 acyl-coenzyme A thioesterase 131.4e-7698.06Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVAS+IDALP RFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDA+VLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A6J1ICC5 acyl-coenzyme A thioesterase 131.6e-7798.71Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTD+RVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVAL TLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

SwissProt top hitse value%identityAlignment
P34419 Putative esterase F42H10.66.6e-1235.09Show/hide
Query:  NFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELR
        N V  D+    +   ++VC + V  + LN   +LHGG +A+L D I + A+     +    S+E+ +SYL    + + +EI A VL++G+T+A  + E R
Subjt:  NFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELR

Query:  RKGNGKIIAQGRHT
        RK +GK+ A+G+HT
Subjt:  RKGNGKIIAQGRHT

P87304 Putative esterase C31F10.022.7e-1336.67Show/hide
Query:  YENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDA-AYLDEEIEIDAKVLRLGKTIAVINV
        ++  V++D+++    PG + CSLK+    LN   +LHGG  A+L D  GS+AL + G   +GVS+++N ++L +   L   I + AK  RLG  IA  +V
Subjt:  YENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDA-AYLDEEIEIDAKVLRLGKTIAVINV

Query:  ELRRKGNGKIIAQGRHTKYL
        +     N ++ A+GRHTK++
Subjt:  ELRRKGNGKIIAQGRHTKYL

Q5R833 Acyl-coenzyme A thioesterase 131.5e-1946.15Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRH
        PG+++C +KV     N   +LHGG +A+LVD I ++AL        GVS+++N++Y+  A L E+I I A VL+ GKT+A  +V+L  K  GK+IAQGRH
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRH

Query:  TKYL
        TK+L
Subjt:  TKYL

Q9CQR4 Acyl-coenzyme A thioesterase 135.6e-1944.23Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRH
        P +++C +KV  +  N+  +LHGG +A+LVD I ++AL        GVS+++N++Y+  A + EEI I A +L+ GKT+A  +V+L  K  GK+IAQGRH
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRH

Query:  TKYL
        TK+L
Subjt:  TKYL

Q9NPJ3 Acyl-coenzyme A thioesterase 131.5e-1946.15Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRH
        PG+++C +KV     N   +LHGG +A+LVD I ++AL        GVS+++N++Y+  A L E+I I A VL+ GKT+A  +V+L  K  GK+IAQGRH
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRH

Query:  TKYL
        TK+L
Subjt:  TKYL

Arabidopsis top hitse value%identityAlignment
AT1G04290.1 Thioesterase superfamily protein2.5e-4660Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        +E  K+YLE   D+D++     +  LP RF E FV   L+VDLIEPGRIVCS+K+P  LLN    LHGGA+A+LVD IGS  + T GA+ +GVS+EIN+S
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAA+LDEEIEI++K LR+GK +AV++VELR+K  GKIIAQGRHTKY A  S L
Subjt:  YLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

AT1G52191.1 Thioesterase superfamily protein1.8e-0933.33Show/hide
Query:  FVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVIN---VE
        F++  L+V  +  G + C L V   +LNE+ +LH  A   L++ +G++A+ + G + T  S+++N S    A + EEI+I+A+V  +GK    +N   +E
Subjt:  FVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDAKVLRLGKTIAVIN---VE

Query:  LRRKGNGKIIAQGR
        +RR+   ++IA GR
Subjt:  LRRKGNGKIIAQGR

AT2G29590.1 Thioesterase superfamily protein8.3e-1836.71Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASTIDAL---PFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEI
        MEK   YL+  D+  D   A  ++        FYENF +  +RV+ +EPG I CS KVP RL + + +L  GA A+LVD +G   +   G     VS+++
Subjt:  MEKTKRYLEKHDDDDDRKVASTIDAL---PFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEI

Query:  NLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        ++++L  A L EE+EI +++L          V +R K  G+IIA+GRH+ +   +SKL
Subjt:  NLSYLDAAYLDEEIEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACGAAGAGATACCTGGAGAAGCATGATGATGATGATGATCGGAAGGTTGCGTCCACCATTGATGCCCTTCCTTTCAGATTTTACGAAAACTTTGTGATGAC
TGATCTGCGCGTTGATCTCATCGAACCTGGTCGGATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTGAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCAC
TCGTCGACTGTATTGGTTCTGTAGCGTTAAAGACTTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGAGGAA
ATCGAGATCGACGCGAAGGTTTTGCGATTGGGAAAGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGCAATGGTAAAATTATTGCTCAGGGTCGTCACACCAA
GTACCTTGCCATCTCAAGCAAATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGACGAAGAGATACCTGGAGAAGCATGATGATGATGATGATCGGAAGGTTGCGTCCACCATTGATGCCCTTCCTTTCAGATTTTACGAAAACTTTGTGATGAC
TGATCTGCGCGTTGATCTCATCGAACCTGGTCGGATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTGAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCAC
TCGTCGACTGTATTGGTTCTGTAGCGTTAAAGACTTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGAGGAA
ATCGAGATCGACGCGAAGGTTTTGCGATTGGGAAAGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGCAATGGTAAAATTATTGCTCAGGGTCGTCACACCAA
GTACCTTGCCATCTCAAGCAAATTGTAG
Protein sequenceShow/hide protein sequence
MEKTKRYLEKHDDDDDRKVASTIDALPFRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEE
IEIDAKVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL