; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27875 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27875
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Genome locationCarg_Chr14:11083340..11091184
RNA-Seq ExpressionCarg27875
SyntenyCarg27875
Gene Ontology termsGO:0018343 - protein farnesylation (biological process)
GO:0018344 - protein geranylgeranylation (biological process)
GO:0005953 - CAAX-protein geranylgeranyltransferase complex (cellular component)
GO:0005965 - protein farnesyltransferase complex (cellular component)
GO:0004660 - protein farnesyltransferase activity (molecular function)
GO:0004662 - CAAX-protein geranylgeranyltransferase activity (molecular function)
InterPro domainsIPR002088 - Protein prenyltransferase, alpha subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582046.1 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]4.6e-5690Show/hide
Query:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV
        + LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ   V
Subjt:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV

Query:  ITRSPLLGGLQS-HESSLKY
        ITRSPLLGGL++  ES + Y
Subjt:  ITRSPLLGGLQS-HESSLKY

XP_022955792.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita moschata]4.6e-5690Show/hide
Query:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV
        + LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ   V
Subjt:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV

Query:  ITRSPLLGGLQS-HESSLKY
        ITRSPLLGGL++  ES + Y
Subjt:  ITRSPLLGGLQS-HESSLKY

XP_022979874.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita maxima]4.6e-5690Show/hide
Query:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV
        + LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ   V
Subjt:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV

Query:  ITRSPLLGGLQS-HESSLKY
        ITRSPLLGGL++  ES + Y
Subjt:  ITRSPLLGGLQS-HESSLKY

XP_023527416.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita pepo subsp. pepo]3.0e-5589.17Show/hide
Query:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV
        + LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDEL YCHELLEEDVFNNSAWNQ   V
Subjt:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV

Query:  ITRSPLLGGLQS-HESSLKY
        ITRSPLLGGL++  ES + Y
Subjt:  ITRSPLLGGLQS-HESSLKY

XP_038900826.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Benincasa hispida]2.5e-5486.18Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDAS KE+EFTK ILSLDSKNYHAWSHRQWVLQALGGWEDEL+YCHELLEEDVFNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS-HESSLKYLRDFI
        RSPLLGGL++  ES + Y  D I
Subjt:  RSPLLGGLQS-HESSLKYLRDFI

TrEMBL top hitse value%identityAlignment
A0A0A0KW41 Uncharacterized protein4.0e-5385.59Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        LHDELNFLD+IAESNTKNYQIWHHRRWVAQKLGTDA+ KE+EFT+ I+SLDSKNYHAWSHRQWVLQALGGWEDELDYCHELL+EDVFNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS-HESSLKY
        RSPLLGGL+S  ES + Y
Subjt:  RSPLLGGLQS-HESSLKY

A0A5A7TSR3 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha7.5e-5283.9Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        LHDELNFLD+IAESNTKNYQIWHHRRWVAQKLGT+A+ KE+EFT+ I+SLDSKNYHAWSHRQWVLQALGGWE ELDYCHELL+EDVFNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS-HESSLKY
        RSPLLGGLQ+  ES + Y
Subjt:  RSPLLGGLQS-HESSLKY

A0A6J1CVB2 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha1.2e-5284.75Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        LHDEL+F+DD+AESNTKNYQIWHHRRWVAQKLGTDAS KE++FTKNILSLD+KNYHAWSHRQWVLQALGGWEDELDYC ELLEEDVFNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS-HESSLKY
        RSPLLGGL++  ES + Y
Subjt:  RSPLLGGLQS-HESSLKY

A0A6J1GUK6 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.2e-5690Show/hide
Query:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV
        + LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ   V
Subjt:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV

Query:  ITRSPLLGGLQS-HESSLKY
        ITRSPLLGGL++  ES + Y
Subjt:  ITRSPLLGGLQS-HESSLKY

A0A6J1IXT4 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.2e-5690Show/hide
Query:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV
        + LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ   V
Subjt:  LTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILV

Query:  ITRSPLLGGLQS-HESSLKY
        ITRSPLLGGL++  ES + Y
Subjt:  ITRSPLLGGLQS-HESSLKY

SwissProt top hitse value%identityAlignment
O24304 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha3.2e-4453.57Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        LH E  F++ +A  N+KNYQIWHHRRWVA+KLG +A   E+EFTK ILS+D+K+YHAWSHRQWVLQ LGGWEDEL YC ELL ED+FNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS------------------HESSLKYLRDFIPVTHTQDYLPNKFLPSALKSFGAKTSYL
        RSP+LGGL++                  +ESS +YLR       T      +     LK    K++YL
Subjt:  RSPLLGGLQS------------------HESSLKYLRDFIPVTHTQDYLPNKFLPSALKSFGAKTSYL

P29702 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha1.7e-2454.26Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ
        LH+E+N++  I E   KNYQ+WHHRR + + L  D S +E+EF  +IL+ D+KNYHAW HRQWV+Q    W++EL Y  +LL+EDV NNS WNQ
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ

P49354 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.2e-2454.26Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ
        LH+E+N++  I E   KNYQ+WHHRR + + L  D S +E+EF  +IL+ D+KNYHAW HRQWV+Q    W++EL Y  +LL+EDV NNS WNQ
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ

P93227 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha1.9e-4474.07Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        L +EL F+D IA  NTKNYQIWHHRRW+A+KLG DA   E+EFTK I S D+KNYHAWSHRQWVLQALGGWEDEL YC +LLE+D++NNSAWNQ   V+T
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGL
        RSPLLGGL
Subjt:  RSPLLGGL

Q9LX33 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.0e-4670.34Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        L +EL F++ IAE N+KNYQ+WHHRRWVA+KLG D + +E+EFT+ +LSLD+K+YHAWSHRQW L+ALGGWEDELDYCHELLE DVFNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS-HESSLKY
        +SPLLGGL++  ES + Y
Subjt:  RSPLLGGLQS-HESSLKY

Arabidopsis top hitse value%identityAlignment
AT3G59380.1 farnesyltransferase A1.4e-4770.34Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT
        L +EL F++ IAE N+KNYQ+WHHRRWVA+KLG D + +E+EFT+ +LSLD+K+YHAWSHRQW L+ALGGWEDELDYCHELLE DVFNNSAWNQ   VIT
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQ-ILVIT

Query:  RSPLLGGLQS-HESSLKY
        +SPLLGGL++  ES + Y
Subjt:  RSPLLGGLQS-HESSLKY

AT4G24490.1 RAB geranylgeranyl transferase alpha subunit 12.7e-1430.58Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWE-DELDYCHELLEEDVFNNSAWNQILVIT
        L +EL  ++     N K+Y  WHHR+WV  K G  +   E+   +    LDS+N+HAW++R++V++     E DEL Y  +++  +  N SAW+   V+ 
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWE-DELDYCHELLEEDVFNNSAWNQILVIT

Query:  RSPLLGGLQSHESSLKYLRDF
         S L         ++K   ++
Subjt:  RSPLLGGLQSHESSLKYLRDF

AT4G24490.2 RAB geranylgeranyl transferase alpha subunit 12.7e-1430.58Show/hide
Query:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWE-DELDYCHELLEEDVFNNSAWNQILVIT
        L +EL  ++     N K+Y  WHHR+WV  K G  +   E+   +    LDS+N+HAW++R++V++     E DEL Y  +++  +  N SAW+   V+ 
Subjt:  LHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWE-DELDYCHELLEEDVFNNSAWNQILVIT

Query:  RSPLLGGLQSHESSLKYLRDF
         S L         ++K   ++
Subjt:  RSPLLGGLQSHESSLKYLRDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACTTTACATGATGAACTAAATTTCCTTGATGACATTGCTGAGTCTAACACCAAAAACTATCAGATATGGCACCATAGGCGATGGGTTGCTCAGAAGCTGGGAAC
TGATGCTTCAAGAAAAGAGATTGAATTCACCAAAAATATTCTCTCTCTTGATTCCAAAAATTATCATGCCTGGTCTCATAGACAGTGGGTTCTTCAGGCACTGGGTGGAT
GGGAAGATGAACTTGACTATTGTCACGAGCTCCTAGAGGAAGATGTTTTTAATAATTCTGCATGGAATCAGATACTTGTCATAACCAGATCTCCATTACTGGGTGGCTTA
CAAAGCCATGAGAGTAGTCTGAAATATCTGCGCGACTTTATTCCGGTGACACACACTCAGGATTACTTGCCCAACAAGTTTCTTCCGTCTGCTTTGAAAAGTTTTGGAGC
GAAAACTTCGTATTTGCTTGAGCACCCTGATGAATTCTTCTCTGTGTCATGGTATTCCAACCAAGCCAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
AATTGAGAAGAAGGTCGCCGTCGGAATACAGTTCAAAGTGGAAGAGCTGTTCATGATCCCTAGTTAATTCCCACTTCCATTCACAGTCTTCTGAGTTTTGATCCTTTCTT
TTCTCAATTTTGCGGTTGCTGTTGCGTGTTTAGCCAGCAACAGAGATGGATTCCGACGATAGGATCCCGCTGAGTGAGCGTCCGGAGTGGTCGGACGTTACTCCGCTTCC
GCAGGACGATGGTCCGAATCCGATTGTGGCGATCGCCTACAAAGAAGACTTCGCTGAGGTCATGAATTACTTCCGAGCTGTATATCGAGCAGATGAGCGTTCTCCTCGCT
CTCTCGACCTCACTGCCGAAGCCATTGCCATGAATCCTGGAAATTACACTGTCTGGCATTTCAGGCGCTTGATACTCGAGGCTCTTAATGTTAACTTTACATGATGAACT
AAATTTCCTTGATGACATTGCTGAGTCTAACACCAAAAACTATCAGATATGGCACCATAGGCGATGGGTTGCTCAGAAGCTGGGAACTGATGCTTCAAGAAAAGAGATTG
AATTCACCAAAAATATTCTCTCTCTTGATTCCAAAAATTATCATGCCTGGTCTCATAGACAGTGGGTTCTTCAGGCACTGGGTGGATGGGAAGATGAACTTGACTATTGT
CACGAGCTCCTAGAGGAAGATGTTTTTAATAATTCTGCATGGAATCAGATACTTGTCATAACCAGATCTCCATTACTGGGTGGCTTACAAAGCCATGAGAGTAGTCTGAA
ATATCTGCGCGACTTTATTCCGGTGACACACACTCAGGATTACTTGCCCAACAAGTTTCTTCCGTCTGCTTTGAAAAGTTTTGGAGCGAAAACTTCGTATTTGCTTGAGC
ACCCTGATGAATTCTTCTCTGTGTCATGGTATTCCAACCAAGCCAAGAGTTAA
Protein sequenceShow/hide protein sequence
MLTLHDELNFLDDIAESNTKNYQIWHHRRWVAQKLGTDASRKEIEFTKNILSLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLEEDVFNNSAWNQILVITRSPLLGGL
QSHESSLKYLRDFIPVTHTQDYLPNKFLPSALKSFGAKTSYLLEHPDEFFSVSWYSNQAKS