; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27876 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27876
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibonuclease
Genome locationCarg_Chr14:11097521..11101310
RNA-Seq ExpressionCarg27876
SyntenyCarg27876
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]9.1e-16196.3Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS       K +K EKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

KAG7018477.1 Ribonuclease H2 subunit A [Cucurbita argyrosperma subsp. argyrosperma]7.2e-166100Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS

Query:  AMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWL
        AMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWL
Subjt:  AMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWL

Query:  EDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        EDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  EDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022955431.1 ribonuclease H2 subunit A [Cucurbita moschata]1.4e-16196.63Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKN------IKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS  N      +K EKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKN------IKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]2.6e-16095.62Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS       K +K EKREELFEGLK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]4.1e-16196.3Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS       K +K EKREELFEGLK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease2.6e-15391.25Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLK+LS       K +K EKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A1S3BXP1 Ribonuclease1.2e-15391.92Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELS       K +K EKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A5A7TT92 Ribonuclease1.2e-15391.92Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELS       K +K EKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1GTR5 Ribonuclease6.8e-16296.63Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKN------IKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS  N      +K EKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKN------IKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1IPY0 Ribonuclease1.3e-16095.62Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS       K +K EKREELFEGLK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A4.2e-6042.12Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISH
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L        K +   +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SH
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISH

Query:  DSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKC
        D+A GL+   L  GV +T+V+VDTVG PE Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD+ ++ W   E  +++  ++GSGYP DP TK 
Subjt:  DSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKC

Query:  WLEDHKHSVFGFPTLVRFSWGTC-TSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT
        WL++H   VFGFP  VRFSW T  T   K+  +V WE     +  +    G +++        TS   +E  ++  +   ++F  R LE  T
Subjt:  WLEDHKHSVFGFPTLVRFSWGTC-TSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT

Q2TBT5 Ribonuclease H2 subunit A2.7e-5943.1Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINL
        +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L        K +   +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NL
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINL

Query:  NEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGD
        N +SHD+A GLV   L  GV + +V+VDTVG PE Y+ +L ++FP ++  V  KAD+LYPVVS ASI AKV RD+ +++W   E  +++  ++GSGYP D
Subjt:  NEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGD

Query:  PTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVE-VSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT
        P TK WL  H   VFGFP  VRFSW T  S  +   E V WE     E G   G GK                SE  ++  +   ++FQ R LE  T
Subjt:  PTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVE-VSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT

Q5U209 Ribonuclease H2 subunit A3.8e-6146.12Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L        K +   +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   +   V +T+V+VDTVG PE Y+ +L ++FP ++  V  KADSL+PVVS ASI+AKV RD+ +++W   E+ + +  ++GSGYP DP TK
Subjt:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK

Query:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED
         WL  H   VFGFP  VRFSW T  +   K+   V+WE    +ED
Subjt:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED

Q9CWY8 Ribonuclease H2 subunit A8.5e-6146.94Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L        K +   +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSL------KNIKREKREELFEGLKTN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   L   V +T+V+VDTVG PE Y+ +L + FP ++  V  KADSL+PVVS ASI AKV RD+ +++W   E  +++  ++GSGYP DP TK
Subjt:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTK

Query:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED
         WL  H   VFGFP  VRFSW T  +   K+  +V WE  + +ED
Subjt:  CWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED

Q9SEZ6 Ribonuclease H2 subunit A2.9e-11768.01Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+       K +K EKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDR L++W +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-11868.01Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+       K +K EKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDR L++W +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-10763.64Show/hide
Query:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+       K +K EKREEL+E LK ++S+GWAVDVIDPRELS+KML        
Subjt:  MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELS------LKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP
                    KVL MGVLLTE Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDR L++W +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTAATGGGCATCGACGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTA
CTGCACTCGTTCCTATTTGAAAGAACTTTCACTCAAAAACATTAAAAGAGAGAAGAGGGAGGAATTGTTTGAAGGATTGAAGACTAATGAGTCAATTGGATGGGCTGTTG
ATGTCATTGATCCTCGGGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTTACCAAGGTTCTAGGC
ATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAGAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAA
AGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTGACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAACAGCTGAAAACATGCATA
GAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTGGTCCGCTTCAGTTGGGGTACC
TGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGGCAACGGGTGGAAGTGGTAAGAAACAATTAAGACTAAGCAACGT
TGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCGAAAGGACGGTGCAAATTTTTCCAGGCTAGAAAACTTGAACAACTCACTCACTTCTGA
mRNA sequenceShow/hide mRNA sequence
AAGGTATCAGATAAAAGCTTCCATGGCGGGAATCGACCTAAAAGGAACACACAATCGAAAACGCTCAAGAGGGGAAGTGAGATTTGGTAGTAAACTGACGTAGTGAGAAG
AACTCAGCAATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTAATGGGCATCGACGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGG
ATGCTTGTACTGCACTCGTTCCTATTTGAAAGAACTTTCACTCAAAAACATTAAAAGAGAGAAGAGGGAGGAATTGTTTGAAGGATTGAAGACTAATGAGTCAATTGGAT
GGGCTGTTGATGTCATTGATCCTCGGGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTTACCAAG
GTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAGAAGTACAGAATCAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGT
TGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTGACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAACAGCTGAAA
ACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACATTGGTCCGCTTCAGT
TGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGGCAACGGGTGGAAGTGGTAAGAAACAATTAAGACT
AAGCAACGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCGAAAGGACGGTGCAAATTTTTCCAGGCTAGAAAACTTGAACAACTCACTCACT
TCTGAGAGTTCAATGTCATTCTATTGTTCGACCATCCTCCTCTTTTTTGATAATCAACTCAATAGCTGATAAGTGCTATATCTGGTTTGGCTGTGTACTAACGTAGTTAT
AGATAACTAGCTATGTAACTGGCATCAATGTACATGACTTCCTCCATAGCCATTTCAATGTCTAATAACTTAGTTTCGAAGCGTGTTCTAAGTAGTTTGAGGTGCTGTTA
ATTGTTTTGGAATCCTTGAAACGTTCTTGTTTATATACATTTTGAGAAGTGTTCTTAGTTC
Protein sequenceShow/hide protein sequence
MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSLKNIKREKREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLG
MGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGT
CTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF