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Carg27881 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27881
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionvacuolar protein sorting-associated protein 27-like isoform X2
Genome locationCarg_Chr11:3589262..3594237
RNA-Seq ExpressionCarg27881
SyntenyCarg27881
Gene Ontology termsGO:0006623 - protein targeting to vacuole (biological process)
GO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process)
GO:0033565 - ESCRT-0 complex (cellular component)
GO:0032266 - phosphatidylinositol-3-phosphate binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000306 - FYVE zinc finger
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017455 - Zinc finger, FYVE-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588113.1 Rabankyrin-5, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6577.64Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPP LAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN
        EPKSAVEHQP +    CNCGMPLCI        +     LQKK          K  + DSN
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN

KAG7022008.1 VPS27 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-93100Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSNPKE
        EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSNPKE
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSNPKE

XP_022929532.1 vacuolar protein sorting-associated protein 27-like isoform X1 [Cucurbita moschata]5.2e-6577.02Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        ML EPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALP+FDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN
        EPKSAVEHQP +    CNCGMPLCI        +     LQKK          K  + DSN
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN

XP_022929548.1 vacuolar protein sorting-associated protein 27-like isoform X2 [Cucurbita moschata]1.7e-6383.8Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        ML EPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALP+FDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQK
        EPKSAVEHQP +    CNCGMPLCI        +     LQK
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQK

XP_022929552.1 potassium channel KOR2-like isoform X3 [Cucurbita moschata]5.2e-6577.02Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        ML EPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALP+FDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN
        EPKSAVEHQP +    CNCGMPLCI        +     LQKK          K  + DSN
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN

TrEMBL top hitse value%identityAlignment
A0A6J1EN28 potassium channel KOR2-like isoform X32.5e-6577.02Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        ML EPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALP+FDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN
        EPKSAVEHQP +    CNCGMPLCI        +     LQKK          K  + DSN
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN

A0A6J1ESF6 vacuolar protein sorting-associated protein 27-like isoform X28.2e-6483.8Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        ML EPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALP+FDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQK
        EPKSAVEHQP +    CNCGMPLCI        +     LQK
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQK

A0A6J1EUN7 vacuolar protein sorting-associated protein 27-like isoform X12.5e-6577.02Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS
        ML EPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALP+FDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLN DGNVNS
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNS

Query:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN
        EPKSAVEHQP +    CNCGMPLCI        +     LQKK          K  + DSN
Subjt:  EPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN

A0A6J1HTP4 vacuolar protein sorting-associated protein 27-like isoform X16.9e-6375.61Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRP---PSLAVVDQVADTVSQLNFDGN
        MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDI +SVRVCADCFNNSSQSREV RP   PSLAVVDQVADTVSQLN DGN
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRP---PSLAVVDQVADTVSQLNFDGN

Query:  VNSEPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN
        VNSEPKSAVEHQP +    CNCGMPLCI        E     LQKK          K  + DSN
Subjt:  VNSEPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSN

A0A6J1HTR8 vacuolar protein sorting-associated protein 27-like isoform X22.2e-6182.07Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRP---PSLAVVDQVADTVSQLNFDGN
        MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDI +SVRVCADCFNNSSQSREV RP   PSLAVVDQVADTVSQLN DGN
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRP---PSLAVVDQVADTVSQLNFDGN

Query:  VNSEPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQK
        VNSEPKSAVEHQP +    CNCGMPLCI        E     LQK
Subjt:  VNSEPKSAVEHQPGVEHFRCNCGMPLCILCRSSPVYENRICSLQK

SwissProt top hitse value%identityAlignment
Q17AN2 Lateral signaling target protein 2 homolog3.2e-0948.28Show/hide
Query:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCF
        P  +A RC  C  SF  FRRRHHCR CG   C   SS    LP++ +  +VRVC DC+
Subjt:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCF

Q6FQJ1 Vacuolar protein sorting-associated protein 273.2e-0940.32Show/hide
Query:  PPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNN
        P  + ++  C +C   F+   RRHHCR CG   C +HSS  + LP   I+ SVRVC +C+++
Subjt:  PPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNN

Q7QAJ2 Lateral signaling target protein 2 homolog2.5e-0944.78Show/hide
Query:  MLAEPP---PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCF
        M  EPP   P  +A RC  C  +F  FRRRHHCR CG   C   S+    LP++ +  +VRVC DC+
Subjt:  MLAEPP---PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCF

Q810B6 Rabankyrin-53.8e-1041.54Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFN
        ML++ PP+ + + C  C   F    R+HHCR CGR LCH+ S+ ++ + +FD++  VRVC  CF+
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFN

Q9P2R3 Rabankyrin-58.5e-1041.54Show/hide
Query:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFN
        ML++ PP+ + + C  C   F    R+HHCR CGR LCH+ S+ ++ + +FD++  VRVC  CF+
Subjt:  MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFN

Arabidopsis top hitse value%identityAlignment
AT3G14270.1 phosphatidylinositol-4-phosphate 5-kinase family protein1.3e-0528.57Show/hide
Query:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHS------SVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQ
        P Q    C  C C F    RRHHCR CGR  C + ++  +     D+ +       +RVC  CF    Q    D  P ++ + +++ + S+
Subjt:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHS------SVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQ

AT4G33240.1 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases2.9e-0533.33Show/hide
Query:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSS------VRVCADCFNNSSQ
        P Q    C  C   F  F RRHHCR CGR  C + ++  +  P  +   S      +RVC  C+    Q
Subjt:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSS------VRVCADCFNNSSQ

AT4G33240.2 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases2.9e-0533.33Show/hide
Query:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSS------VRVCADCFNNSSQ
        P Q    C  C   F  F RRHHCR CGR  C + ++  +  P  +   S      +RVC  C+    Q
Subjt:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSS------VRVCADCFNNSSQ

AT4G33240.3 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases2.9e-0533.33Show/hide
Query:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSS------VRVCADCFNNSSQ
        P Q    C  C   F  F RRHHCR CGR  C + ++  +  P  +   S      +RVC  C+    Q
Subjt:  PFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSS------VRVCADCFNNSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCGGAGCCTCCTCCTTTCCAGGAAGCAGCGCGCTGTGAAGTCTGCAAATGCAGTTTCAACACCTTCCGACGACGGCATCATTGCCGATGCTGTGGAAGGACGTT
GTGCCACGAGCATTCTTCTTTTCAAATGGCCTTGCCGCAGTTCGATATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAATCTAGAGAAGTTG
ATCGACCACCGTCGTTAGCTGTAGTCGATCAAGTTGCAGATACAGTTTCTCAATTAAACTTTGATGGGAATGTAAATTCTGAGCCTAAGTCAGCTGTGGAGCATCAACCT
GGCGTTGAGCATTTCAGATGCAATTGTGGAATGCCATTGTGCATTTTGTGTCGCTCCAGTCCAGTCTATGAAAACAGAATCTGTTCCTTGCAGAAGAAACAGTTTCCACC
TCTACTCGGAACAATTCAAAAGCAAAGCAGACTGGATTCCAATCCTAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATTTATTTATTATAAAGAGTTGCAGCGCCAGTTCTTGAGGAGATCCGCTACCAGTTTCCCTTCTGAGCTCTGCAAAACGGAGCATTTGACTGAGTTCAGCGGTAGGAGTA
TCACCGCGCTCCGGCGGATAAGACGGTGGTTTCTTGCAGTCAAGATTAATCGGAAGCATCGATAGAAGAGTTGGGGAATCGAGAGGATCGAGCGGCGGAGATCACAAAAA
TGTTGGCGGAGCCTCCTCCTTTCCAGGAAGCAGCGCGCTGTGAAGTCTGCAAATGCAGTTTCAACACCTTCCGACGACGGCATCATTGCCGATGCTGTGGAAGGACGTTG
TGCCACGAGCATTCTTCTTTTCAAATGGCCTTGCCGCAGTTCGATATTCATTCCTCTGTTAGAGTTTGTGCTGACTGTTTCAATAACTCCTCTCAATCTAGAGAAGTTGA
TCGACCACCGTCGTTAGCTGTAGTCGATCAAGTTGCAGATACAGTTTCTCAATTAAACTTTGATGGGAATGTAAATTCTGAGCCTAAGTCAGCTGTGGAGCATCAACCTG
GCGTTGAGCATTTCAGATGCAATTGTGGAATGCCATTGTGCATTTTGTGTCGCTCCAGTCCAGTCTATGAAAACAGAATCTGTTCCTTGCAGAAGAAACAGTTTCCACCT
CTACTCGGAACAATTCAAAAGCAAAGCAGACTGGATTCCAATCCTAAGGAATAGAGGATCTACCTCCAACAGCAAGCTTCGGTATGTTATCTGGAGTTGTTTTTATTCCA
ATAGGAATTTCATGTTCTTGCAGGGGTTGAGGGAAAGCAATCAGAAACGGTGACACTCATGCTGTCAAGAAACTTTTGGTGAGGGTGTAGATGCAAATTACATGACAAGC
AAGGATTGTCTTTGCTGCATGTGGCGGCCGTCTTTAATCAGACTGATATTGTTTTTGCCCTCATTGAAAGTGGTGCTAGCCTGGACTACAAAAATGCTCAAGGAAAAACG
CCATTGGATTGTTGGCTCCAGTTGTTTGCAATAATAAGATGCGAGAGAGATGGGAGGAGAAGTGGAAGAAAAGCAACAGCCCACATCACCTAATATTTAGTAAATACTTC
TATCTTTCTGCACCACCGCGGCCTTTATTTTTTTAATTTTTAAGGAACACGCATGGAGAATTTTGAAACTAATTGAGAAACTAATATAGATTAGGTTTGGTTATATCGTC
GATGGATTGGTTGATGGATTCTTTGAATCGAAGGTTGACCAAGTTGAGTTCAACAACTTGTGGGTGGGGTGTGGCGTGATTCAAATCTTTTACCTTCTGGTGATACGTGT
TACTCGTTGAGTTGTGCTTAAATATTCCAAAGTTGTTGTGTTATATTTGTCAATAATTTTAGTAGAAAGTTCATTGAACACGCCACACAATGACTAGACAATGCTTACGT
GGTAAATTTTAAATAGCGTGACAAAATTGAACTTT
Protein sequenceShow/hide protein sequence
MLAEPPPFQEAARCEVCKCSFNTFRRRHHCRCCGRTLCHEHSSFQMALPQFDIHSSVRVCADCFNNSSQSREVDRPPSLAVVDQVADTVSQLNFDGNVNSEPKSAVEHQP
GVEHFRCNCGMPLCILCRSSPVYENRICSLQKKQFPPLLGTIQKQSRLDSNPKE