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Carg27886 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27886
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIGR domain-containing protein
Genome locationCarg_Chr11:7805817..7808298
RNA-Seq ExpressionCarg27886
SyntenyCarg27886
Gene Ontology termsNA
InterPro domainsIPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588600.1 hypothetical protein SDJN03_17165, partial [Cucurbita argyrosperma subsp. sororia]7.8e-5199.02Show/hide
Query:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
        MAWRQIILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
Subjt:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV

Query:  KA
        KA
Subjt:  KA

XP_022154599.1 uncharacterized protein LOC111021823 [Momordica charantia]4.0e-4790.74Show/hide
Query:  MAWRQI------ILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI      ILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQI------ILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRADLVKA
        PRAD +KA
Subjt:  PRADLVKA

XP_022931564.1 uncharacterized protein LOC111437735 [Cucurbita moschata]2.7e-51100Show/hide
Query:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
        MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
Subjt:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV

Query:  KA
        KA
Subjt:  KA

XP_022989493.1 uncharacterized protein LOC111486535 [Cucurbita maxima]3.6e-4895.1Show/hide
Query:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
        MAWRQIILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVG+GVESHVPKLESEIGDF KLL TRTL+LKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
Subjt:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV

Query:  KA
        KA
Subjt:  KA

XP_023530144.1 uncharacterized protein LOC111792790 [Cucurbita pepo subsp. pepo]8.6e-5097.06Show/hide
Query:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
        MAWRQI LQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTL+LKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
Subjt:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV

Query:  KA
        KA
Subjt:  KA

TrEMBL top hitse value%identityAlignment
A0A6J1DML5 uncharacterized protein LOC1110218231.9e-4790.74Show/hide
Query:  MAWRQI------ILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI      ILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQI------ILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRADLVKA
        PRAD +KA
Subjt:  PRADLVKA

A0A6J1EUK8 uncharacterized protein LOC1114377351.3e-51100Show/hide
Query:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
        MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
Subjt:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV

Query:  KA
        KA
Subjt:  KA

A0A6J1HA49 uncharacterized protein LOC1114619912.8e-4688.89Show/hide
Query:  MAWRQII------LQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQII      LQPYSAPL+ARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQII------LQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRADLVKA
        PR+D +KA
Subjt:  PRADLVKA

A0A6J1HZ75 uncharacterized protein LOC1114679438.2e-4688.79Show/hide
Query:  MAWRQI------ILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
        MAWRQI      ILQPYSAPL+ARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR
Subjt:  MAWRQI------ILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWR

Query:  PRADLVK
        PR+D +K
Subjt:  PRADLVK

A0A6J1JQF2 uncharacterized protein LOC1114865351.8e-4895.1Show/hide
Query:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
        MAWRQIILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVG+GVESHVPKLESEIGDF KLL TRTL+LKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV
Subjt:  MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLV

Query:  KA
        KA
Subjt:  KA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown1.5e-3174.39Show/hide
Query:  SKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLVKA
        SK   Y VKVGIPEFL G+G G E+H+ K+E+EIGD  KLLVTRTL+LKKLGIPCKHRKLILKY  KYRLGLW+PRAD +KA
Subjt:  SKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLVKA

AT5G26800.1 FUNCTIONS IN: molecular_function unknown6.4e-3565.18Show/hide
Query:  MAWRQII--------LQPYSAPL-YARFFSKS-TPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        MAW ++I          P S+ L + RF+SKS  PY VKVGIPEFL+G+G GVE+H+ KLE+E+GD  KLLVTRTL+LKK GIPCKHRKLILKY+HKYRL
Subjt:  MAWRQII--------LQPYSAPL-YARFFSKS-TPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRADLVKA
        GLW+PRAD +KA
Subjt:  GLWRPRADLVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGGCAGATTATACTGCAACCATACTCAGCTCCTTTATATGCTAGATTCTTTTCTAAATCTACCCCATATGTCGTAAAGGTGGGAATACCAGAGTTTTTAAA
TGGTGTTGGGCATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGACTTCCAGAAGCTGCTTGTTACTCGCACACTTAAGCTCAAAAAACTTGGAATTC
CATGCAAACATAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
TCTTTTTTTCTCTCTCTACCTCTCTCGCATCTTCGCCGATTGACGGAACCCAGTCCTCCGTCTTCTGCTGCAATCTAACGCTGCCACGCCAACCTCCATCTTCGTCCGCA
GTGCCTTCAACTCTTCTCCGCTCCCGTTCAGCAAGAAGAATGGCATGGAGGCAGATTATACTGCAACCATACTCAGCTCCTTTATATGCTAGATTCTTTTCTAAATCTAC
CCCATATGTCGTAAAGGTGGGAATACCAGAGTTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGACTTCCAGAAGCTGC
TTGTTACTCGCACACTTAAGCTCAAAAAACTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCT
GATTTGGTGAAGGCCTGATGGTTTTAACAATGGGTTCATGAGGTGAATTGAATGATTTGGCTGATCCCTGGACCTCAGTTTGTATAACTTTTGAGGATACTTTTTTGGTT
TACCCTGTTTCTTCATTTTACTGCTTTTTTTAATTCTTTCTATTCTTATATAATATGTGCTCTATTCCTCCTCCTTACTTACATATGCAGATTTGATGGTGATTAAGTTG
GGACGTTGTTCAAAAGGATTTCTCATTCTTCTATCAAATATTTTGCTTTTTCCCGGGTACTCGGGTTCAAATACCTATGGACTCGCTGTTTGCTTATTGGCTTCATTTAA
TTCAGAAAAGCCTCTTGTTCATATCTCTCATCAAAAGGTACTATTTGATAATGCATATCTAGCAAACTCCCCTCTAACCTGAA
Protein sequenceShow/hide protein sequence
MAWRQIILQPYSAPLYARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRADLVKA