; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27891 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27891
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNKAP family protein isoform X2
Genome locationCarg_Chr10:9331712..9334195
RNA-Seq ExpressionCarg27891
SyntenyCarg27891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023993.1 hypothetical protein SDJN02_15021, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-72100Show/hide
Query:  MPKLKVGYEPHDAIPSLSLAASPLVLLETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSS
        MPKLKVGYEPHDAIPSLSLAASPLVLLETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSS
Subjt:  MPKLKVGYEPHDAIPSLSLAASPLVLLETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSS

Query:  DSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTKTVDVFTQHFFSYLAL
        DSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTKTVDVFTQHFFSYLAL
Subjt:  DSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTKTVDVFTQHFFSYLAL

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]5.6e-1373.17Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR+KDR TLRIRKKSRSHSKR RRHRRSSSDSLSSSDS+S    +   SNSSS+SE E   RSKRHKKN RTK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]3.3e-1374.39Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR KDR  LRIRKKSRSHSKRRRRHRRSSSDSLSSSDS+S      + S SSSQSE E  GRSKRHKKN RTK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

XP_023515954.1 uncharacterized protein LOC111779964 [Cucurbita pepo subsp. pepo]8.6e-4682.35Show/hide
Query:  MPKLKVGYEPHDAIPSLSLAASPLVLLETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSS
        MPKLKVGYEPHDAIPSLSLAASPLVL ETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSS
Subjt:  MPKLKVGYEPHDAIPSLSLAASPLVLLETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSS

Query:  DSDSITPGNLNISNSSSQSELEEFG--RSKRHKKNG
        DSDSITP  + +   S +S   + G  R    K+ G
Subjt:  DSDSITPGNLNISNSSSQSELEEFG--RSKRHKKNG

XP_038879353.1 NKAP family protein [Benincasa hispida]5.6e-1370.73Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR+KDR TLR+RKKSRSHSKR RRHRRSSSDSLSSSDS+S    + + +NSSSQSE E  GRSKRHK+N R K
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

TrEMBL top hitse value%identityAlignment
A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G2.7e-1373.17Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR+KDR TLRIRKKSRSHSKR RRHRRSSSDSLSSSDS+S    +   SNSSS+SE E   RSKRHKKN RTK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

A0A6J1C3K8 serine/arginine-rich splicing factor 111.6e-1374.39Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR KDR  LRIRKKSRSHSKRRRRHRRSSSDSLSSSDS+S      + S SSSQSE E  GRSKRHKKN RTK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

A0A6J1EV15 serine/arginine-rich splicing factor 11 isoform X11.4e-1271.95Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR+KDR  LRIRKKSRSHSKRRRRHRRSSS+SLSSSDS+S    + + S+SSSQSE E  GRSKRHKKN  TK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X11.4e-1271.95Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR+KDR  LRIRKKSRSHSKRRRRHRRSSS+SLSSSDS+S    + + S+SSSQSE E  GRSKRHKKN  TK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

A0A6J1I4D4 NKAP family protein isoform X21.4e-1271.95Show/hide
Query:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK
        SR R RR  RR+KDR  LRIRKKSRSHSKRRRRHRRSSS+SLSSSDS+S    + + S+SSSQSE E  GRSKRHKKN  TK
Subjt:  SRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNLNISNSSSQSELEEFGRSKRHKKNGRTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAACTAAAAGTAGGGTATGAACCCCATGACGCCATCCCGTCCCTTTCCTTAGCGGCTAGCCCTTTGGTCCTTCTCGAAACCATAATCTCCCACTCTCTCCAATG
GCGTCCTCGTCTTCGTTGGCAACATCCTACTCTTCCGACTCATCGTCTTCTTCTTTCTCGTGTTCGCCATCGCCGGGGAATTCGCCGTCAAAAAGATCGGGCCACGCTTA
GGATTCGCAAGAAATCTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCATCTGACTCCGATTCCATTACTCCCGGTAACCTG
AACATAAGCAATAGCTCTTCTCAAAGTGAGCTTGAAGAGTTTGGCCGTTCAAAGCGGCATAAGAAGAATGGTAGAACGAAAACGGTAGATGTTTTTACACAACATTTCTT
TTCCTATTTGGCTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAACTAAAAGTAGGGTATGAACCCCATGACGCCATCCCGTCCCTTTCCTTAGCGGCTAGCCCTTTGGTCCTTCTCGAAACCATAATCTCCCACTCTCTCCAATG
GCGTCCTCGTCTTCGTTGGCAACATCCTACTCTTCCGACTCATCGTCTTCTTCTTTCTCGTGTTCGCCATCGCCGGGGAATTCGCCGTCAAAAAGATCGGGCCACGCTTA
GGATTCGCAAGAAATCTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGACTCTCTCTCTTCATCTGACTCCGATTCCATTACTCCCGGTAACCTG
AACATAAGCAATAGCTCTTCTCAAAGTGAGCTTGAAGAGTTTGGCCGTTCAAAGCGGCATAAGAAGAATGGTAGAACGAAAACGGTAGATGTTTTTACACAACATTTCTT
TTCCTATTTGGCTTTGTAGTTTCACTTGTGGATTTCTCCTTGTTATTGTTACTATTTGTGCATCGATAAGAAGAGGGAGCGAAGTTAGAAACATCACCATGAAAGGCGTA
AGCATAAGGCTAAAGAGGTAGACCACTATTGTGCTTGTGTACTATTTTTCCCTTTGTTGCTGATAATGTTGTAATTTCGATGAATTGAGAAATGCCATGGAAATAACCTC
TATGTATGTTAGATTTATGGA
Protein sequenceShow/hide protein sequence
MPKLKVGYEPHDAIPSLSLAASPLVLLETIISHSLQWRPRLRWQHPTLPTHRLLLSRVRHRRGIRRQKDRATLRIRKKSRSHSKRRRRHRRSSSDSLSSSDSDSITPGNL
NISNSSSQSELEEFGRSKRHKKNGRTKTVDVFTQHFFSYLAL