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Carg27897 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27897
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionT-box protein 41
Genome locationCarg_Chr10:9155750..9159341
RNA-Seq ExpressionCarg27897
SyntenyCarg27897
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590441.1 hypothetical protein SDJN03_15864, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6579.39Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLGDAVVDVNYLDTGNAVPNYQIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

KAG7023977.1 hypothetical protein SDJN02_15005 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-73100Show/hide
Query:  MTFKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPS
        MTFKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPS
Subjt:  MTFKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPS

Query:  NSTKDWEAPDDLGDAVVDVNYLDTGNAVPNYQIFIC
        NSTKDWEAPDDLGDAVVDVNYLDTGNAVPNYQIFIC
Subjt:  NSTKDWEAPDDLGDAVVDVNYLDTGNAVPNYQIFIC

XP_022961440.1 uncharacterized protein LOC111462023 [Cucurbita moschata]1.1e-6378.18Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPS S
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEA-------------------------------PDDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEA                                DDLGDAVVDVNYLDTGNAVPNYQIFIC
Subjt:  TKDWEA-------------------------------PDDLGDAVVDVNYLDTGNAVPNYQIFIC

XP_022968759.1 uncharacterized protein LOC111467901 [Cucurbita maxima]2.8e-6476.97Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYLKFLFELIAARSAA+GLN+TLNRFDLFHGHLFL+FDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLGDAVVDVNYLDTGNA+PNYQIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

XP_023515948.1 uncharacterized protein LOC111779958 [Cucurbita pepo subsp. pepo]5.7e-6578.18Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYLKFLFELIAARSAA+GLN+TLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLGDAVVDVNYLDTGNAVPNYQIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

TrEMBL top hitse value%identityAlignment
A0A1S3BQN4 uncharacterized protein LOC1034921594.4e-5567.88Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYL+ LFELIA RS+A+G+NI LNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYD+K FP NMGYCQIGSNV YD SMN+RNILWLAP+PS+S
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLGD VVDVNYLD GNA+ NYQIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

A0A5D3CG84 T-box protein 414.4e-5567.88Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYL+ LFELIA RS+A+G+NI LNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYD+K FP NMGYCQIGSNV YD SMN+RNILWLAP+PS+S
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLGD VVDVNYLD GNA+ NYQIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

A0A6J1CVR7 uncharacterized protein LOC1110152322.1e-5768.48Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYL+FLFE+I ARSAA+GLNITL+RFD FHGHLF+AFDNNRLGILFHAKEFPAYDEK FPYNMGYCQIGSNV YD S+N+RNILWLAP+PSNS
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLG+ VVDVNYLDTGN +PN+QIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

A0A6J1HA77 uncharacterized protein LOC1114620235.2e-6478.18Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPS S
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEA-------------------------------PDDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEA                                DDLGDAVVDVNYLDTGNAVPNYQIFIC
Subjt:  TKDWEA-------------------------------PDDLGDAVVDVNYLDTGNAVPNYQIFIC

A0A6J1I0L2 uncharacterized protein LOC1114679011.4e-6476.97Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +ELNSYLKFLFELIAARSAA+GLN+TLNRFDLFHGHLFL+FDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC
        TKDWEAP                               DDLGDAVVDVNYLDTGNA+PNYQIFIC
Subjt:  TKDWEAP-------------------------------DDLGDAVVDVNYLDTGNAVPNYQIFIC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27710.1 unknown protein1.6e-4157.89Show/hide
Query:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS
        F  +E+NSY +FLF LI +R  ++GLN++L+R+DLFHGHLFLA ++ RLGILFHAKE+PAYD+K FPYNMGYCQ GS+V Y+ SMN+RNILWLAP+PSNS
Subjt:  FKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNS

Query:  TKDWEAPDDLGDAVVDVNYLDTGNAVPNYQIFI
        + DW AP  L       + +   + +P+Y  F+
Subjt:  TKDWEAPDDLGDAVVDVNYLDTGNAVPNYQIFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTCAAATTGCAGGAACTAAATTCATATTTAAAGTTCCTGTTCGAGCTCATTGCTGCTCGATCCGCTGCTCTGGGATTAAACATTACATTGAACCGTTTCGATTT
ATTTCACGGTCATCTTTTTCTTGCCTTCGACAATAACAGGCTTGGTATTCTGTTTCATGCTAAGGAATTCCCAGCTTATGATGAGAAGGCTTTTCCATACAACATGGGCT
ATTGTCAAATTGGATCTAATGTACCCTATGATGCTTCGATGAACATGAGAAATATCCTCTGGCTGGCACCAATTCCCAGCAATTCTACCAAGGATTGGGAGGCACCAGAT
GATCTTGGGGATGCTGTGGTTGATGTCAACTACTTGGACACAGGCAATGCTGTGCCAAATTATCAAATATTCATATGCTAA
mRNA sequenceShow/hide mRNA sequence
CAATGCGTACTCTTATAAATAATACTTCGTTTCCATCTCCAACCGAGGTGGGATCTCACAAAATGACTCTCTTTCTATAGTTTTAAGCTCTTAACTGAACTATGAATTAA
GGATGAGTTTCTATCATTGTTCTATATTAAGTGAACATTGATGTCCTGTATTATGTGATGATAAGAAGGCAATCACAAAATCTGAGTAGTTCAATGAGGATTGAGAACCT
AGTTTATTAACTCCTACATGCTTTAGTAATGCAACAGATACCCAACGTTCATGGATCAAAAAAACACAAATGCGAACTCACAAGAACACCATATGGAAGACGCTTCATAA
GCGAGGTCTGTTTTTACACTCTAAAAAACTACTGTGACATTTGATTTGGACATATAAATGGTGTATGACATTCAAATTGCAGGAACTAAATTCATATTTAAAGTTCCTGT
TCGAGCTCATTGCTGCTCGATCCGCTGCTCTGGGATTAAACATTACATTGAACCGTTTCGATTTATTTCACGGTCATCTTTTTCTTGCCTTCGACAATAACAGGCTTGGT
ATTCTGTTTCATGCTAAGGAATTCCCAGCTTATGATGAGAAGGCTTTTCCATACAACATGGGCTATTGTCAAATTGGATCTAATGTACCCTATGATGCTTCGATGAACAT
GAGAAATATCCTCTGGCTGGCACCAATTCCCAGCAATTCTACCAAGGATTGGGAGGCACCAGATGATCTTGGGGATGCTGTGGTTGATGTCAACTACTTGGACACAGGCA
ATGCTGTGCCAAATTATCAAATATTCATATGCTAA
Protein sequenceShow/hide protein sequence
MTFKLQELNSYLKFLFELIAARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSNVPYDASMNMRNILWLAPIPSNSTKDWEAPD
DLGDAVVDVNYLDTGNAVPNYQIFIC