; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27898 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27898
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionREF/SRPP-like protein At3g05500
Genome locationCarg_Chr10:9140979..9142915
RNA-Seq ExpressionCarg27898
SyntenyCarg27898
Gene Ontology termsNA
InterPro domainsIPR008802 - Rubber elongation factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590440.1 Respiratory burst oxidase-like protein B, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7476.62Show/hide
Query:  GGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK------------------------------
        GGLKYLEF+LKAAFRAAMCLLKFY YAKDWSGPLKFG+EAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK                              
Subjt:  GGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK------------------------------

Query:  ----------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDKIK
                  IQRSGLKDTVT I+RSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRAS EK NKVASLLPLVPTEGIAKVFDKIK
Subjt:  ----------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDKIK

Query:  I
        I
Subjt:  I

KAG7023976.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma]3.8e-87100Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLKDTVTSIMRSVYPKAEQ
        MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLKDTVTSIMRSVYPKAEQ
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLKDTVTSIMRSVYPKAEQ

Query:  SAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDKIKI
        SAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDKIKI
Subjt:  SAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDKIKI

XP_004135611.1 REF/SRPP-like protein At3g05500 [Cucumis sativus]9.8e-5154.55Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        M  RA++G LKYLEFV  AAFRA  C    YGYAKD SGPLK G+E +EGTVKSVV PLYNK HG   EVLKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN
                         ++R+GLKD+V+ I++SVY               PKAEQ AASAWH LNQLPVFPTVAQAI+PTAA CTEKYN+TVR SA+K  
Subjt:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN

Query:  KVASLLPLVPTEGIAKVFDK
        KV+S LPLVPTE IAKVF K
Subjt:  KVASLLPLVPTEGIAKVFDK

XP_022961535.1 REF/SRPP-like protein At3g05500 [Cucurbita moschata]2.7e-7776.92Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        MAARAEEGGLKYLEF+LKAAFRAAMCLLKFY YAKDWSGPLKFG+EAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIA
                         IQRSGLKDTVT I++SVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEK NKVASLLPLVPTEGIA
Subjt:  -----------------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIA

Query:  KVFDKIKI
        KVF KIKI
Subjt:  KVFDKIKI

XP_023515953.1 REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]2.4e-7375Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        MAARAEEGGLKYLEFVLKAAFRAA CLLKFYGYAKDWSGPLKFG+EAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIA
                         IQRSGLKDTVT I++SV PKAEQSAASAWHALNQLPVF TVAQAIVPTAAL TEKYNDTVRASAEK NKVASLLPLVP EGIA
Subjt:  -----------------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIA

Query:  KVFDKIKI
        +VF KIKI
Subjt:  KVFDKIKI

TrEMBL top hitse value%identityAlignment
A0A0A0M1J0 Uncharacterized protein4.8e-5154.55Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        M  RA++G LKYLEFV  AAFRA  C    YGYAKD SGPLK G+E +EGTVKSVV PLYNK HG   EVLKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN
                         ++R+GLKD+V+ I++SVY               PKAEQ AASAWH LNQLPVFPTVAQAI+PTAA CTEKYN+TVR SA+K  
Subjt:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN

Query:  KVASLLPLVPTEGIAKVFDK
        KV+S LPLVPTE IAKVF K
Subjt:  KVASLLPLVPTEGIAKVFDK

A0A1S3BP12 REF/SRPP-like protein At3g055006.2e-5155.45Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        MA RA+E  LKYLEFV  AAFRA  C    YGYAKD SGPLK G+E +EGTVKSVVGPL NK HG   EVLKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN
                         ++RSGLKD+V+ I++SVY               PKAEQ AASAWH LNQLPVFPTVAQAI+PTAA CTEKYN+TVR SA+K  
Subjt:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN

Query:  KVASLLPLVPTEGIAKVFDK
        KV+S LPLVPTE IAKVF K
Subjt:  KVASLLPLVPTEGIAKVFDK

A0A5D3CFW4 REF/SRPP-like protein6.2e-5155.45Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        MA RA+E  LKYLEFV  AAFRA  C    YGYAKD SGPLK G+E +EGTVKSVVGPL NK HG   EVLKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN
                         ++RSGLKD+V+ I++SVY               PKAEQ AASAWH LNQLPVFPTVAQAI+PTAA CTEKYN+TVR SA+K  
Subjt:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN

Query:  KVASLLPLVPTEGIAKVFDK
        KV+S LPLVPTE IAKVF K
Subjt:  KVASLLPLVPTEGIAKVFDK

A0A6J1CYC3 REF/SRPP-like protein At3g055001.5e-4953.81Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        MAARAEE  LKYL FV  AAF A  C    YGYAKD SGPLK G+E +EGTVKSVVGPLYNK HG   EVLKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN
                         ++RSGLKD+++ I++SVY               PKAEQ AA AWH LNQLPVFP VAQAI+PTAA CTEKYN+TVR +AEK  
Subjt:  -----------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDN

Query:  KVASLLPLVPTEGIAKVFDKIKI
        KV+S LPLVPTE IAKVF K ++
Subjt:  KVASLLPLVPTEGIAKVFDKIKI

A0A6J1HCH6 REF/SRPP-like protein At3g055001.3e-7776.92Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        MAARAEEGGLKYLEF+LKAAFRAAMCLLKFY YAKDWSGPLKFG+EAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  -----------------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIA
                         IQRSGLKDTVT I++SVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEK NKVASLLPLVPTEGIA
Subjt:  -----------------IQRSGLKDTVTSIMRSVYPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIA

Query:  KVFDKIKI
        KVF KIKI
Subjt:  KVFDKIKI

SwissProt top hitse value%identityAlignment
A2Y0H2 REF/SRPP-like protein OsI_0178157.6e-3037.2Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        M A AEE  L+YLEFV +AA +  +     Y YAK  +GPL+ G++ +EGTVK+VVGP+Y++ HG   ++LKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  ------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPT
              ++++GL  T T + +S                 P AE+ AA AW ALN+LP+ P+V +A++P AA  + +YN  V   A++ + VA+ LPLVPT
Subjt:  ------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPT

Query:  EGIAKVF
        E +++VF
Subjt:  EGIAKVF

Q41112 Stress-related protein2.9e-2946.2Show/hide
Query:  YGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKI-----------------QRSGL----KDTVTSIMRSVY----PKAEQSAASA
        Y YAK+ +GPLK G+  +E  VK+VV P+Y++ H    E+LK+ DRK+                  RS +    +D V++  ++VY    P AEQ A SA
Subjt:  YGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKI-----------------QRSGL----KDTVTSIMRSVY----PKAEQSAASA

Query:  WHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVF
        W  LNQLP+FP VA A++P AA CTEKYN+ + +SAEK  +V++ LPLVPTE IAKVF
Subjt:  WHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVF

Q9FRA7 REF/SRPP-like protein Os05g0151300/LOC_Os05g059407.6e-3037.2Show/hide
Query:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------
        M A AEE  L+YLEFV +AA +  +     Y YAK  +GPL+ G++ +EGTVK+VVGP+Y++ HG   ++LKF+DRK                       
Subjt:  MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK-----------------------

Query:  ------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPT
              ++++GL  T T + +S                 P AE+ AA AW ALN+LP+ P+V +A++P AA  + +YN  V   A++ + VA+ LPLVPT
Subjt:  ------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPT

Query:  EGIAKVF
        E +++VF
Subjt:  EGIAKVF

Q9MA63 REF/SRPP-like protein At3g055002.7e-3541.1Show/hide
Query:  RAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK--------------------------
        + E+  LKYL+FV  AA  A +     Y  AKD SGPLK G+E++EG VK+VVGP+Y K H    EVLK++D+K                          
Subjt:  RAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK--------------------------

Query:  --------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVA
                      ++R+G+ +T + + +SVY               PKAEQ A SAW  LNQLP+FP +AQ  VPTAA C+EKYNDTV  +AEK  +V 
Subjt:  --------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVA

Query:  SLLPLVPTEGIAKVFDKIK
        S +PLVPTE I+K+F + K
Subjt:  SLLPLVPTEGIAKVFDKIK

Q9SW70 Stress-related protein1.5e-3340.85Show/hide
Query:  EEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK----------------------------
        EE  LKYL+FV  AA    +C    Y YAK+ SGPLK G++ +EGTVK+V+GP+Y K +    E+L F+DRK                            
Subjt:  EEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK----------------------------

Query:  ------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASL
                    +QR G+ DT  +I ++VY               P AEQ A SAW +LN+LP+FP VAQ +VPTAA  +EKYN +V  +AE+   VA  
Subjt:  ------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASL

Query:  LPLVPTEGIAKVF
        LPL+PTE IAKVF
Subjt:  LPLVPTEGIAKVF

Arabidopsis top hitse value%identityAlignment
AT1G67360.1 Rubber elongation factor protein (REF)1.9e-1226.37Show/hide
Query:  AEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLK--------------------
        ++E  LK+L FV  A       +   Y YAK  SGPLK  +E +EG V +VV P+Y K     + +L F+D K+     K                    
Subjt:  AEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLK--------------------

Query:  -------DTVTSIMRSVYPKAE-------------QSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFD
                +     R+  PKA               ++   W  LNQ      +    +P AA  + +YND V         +   LPLVP + I K ++
Subjt:  -------DTVTSIMRSVYPKAE-------------QSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFD

Query:  K
        K
Subjt:  K

AT1G67360.2 Rubber elongation factor protein (REF)1.9e-1226.37Show/hide
Query:  AEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLK--------------------
        ++E  LK+L FV  A       +   Y YAK  SGPLK  +E +EG V +VV P+Y K     + +L F+D K+     K                    
Subjt:  AEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLK--------------------

Query:  -------DTVTSIMRSVYPKAE-------------QSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFD
                +     R+  PKA               ++   W  LNQ      +    +P AA  + +YND V         +   LPLVP + I K ++
Subjt:  -------DTVTSIMRSVYPKAE-------------QSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFD

Query:  K
        K
Subjt:  K

AT2G47780.1 Rubber elongation factor protein (REF)2.3e-2938.86Show/hide
Query:  EEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK----------------------------
        +E  LK+LEF+  AA   A C    Y  AKD +GPLK G+E +E  V++V+ PLY K H    ++L F+DRK                            
Subjt:  EEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK----------------------------

Query:  -IQRSGLKDTVTSIMRSV----YPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDK
         +QR+G+ DT  SI RSV     P AE  AA+ W  LNQLP+FP VA  ++PTA   +EKYND VR   ++D   A  LP++P E I+ + ++
Subjt:  -IQRSGLKDTVTSIMRSV----YPKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDK

AT3G05500.1 Rubber elongation factor protein (REF)1.9e-3641.1Show/hide
Query:  RAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK--------------------------
        + E+  LKYL+FV  AA  A +     Y  AKD SGPLK G+E++EG VK+VVGP+Y K H    EVLK++D+K                          
Subjt:  RAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRK--------------------------

Query:  --------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVA
                      ++R+G+ +T + + +SVY               PKAEQ A SAW  LNQLP+FP +AQ  VPTAA C+EKYNDTV  +AEK  +V 
Subjt:  --------------IQRSGLKDTVTSIMRSVY---------------PKAEQSAASAWHALNQLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVA

Query:  SLLPLVPTEGIAKVFDKIK
        S +PLVPTE I+K+F + K
Subjt:  SLLPLVPTEGIAKVFDKIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCGGGCTGAGGAGGGGGGGCTGAAGTATTTGGAGTTCGTTCTAAAAGCGGCATTTCGAGCAGCAATGTGCTTACTCAAGTTTTACGGCTATGCGAAAGACTG
GTCCGGTCCGCTGAAGTTCGGCATCGAAGCCATGGAAGGCACTGTGAAGTCCGTTGTTGGTCCTTTGTACAATAAGTTACACGGCCCTTCGAATGAGGTTCTTAAGTTCA
TCGATCGCAAGATCCAACGTAGTGGCCTTAAAGACACCGTCACTAGTATTATGAGATCAGTGTATCCCAAGGCGGAACAGTCCGCAGCTTCAGCATGGCACGCACTGAAC
CAGTTGCCTGTCTTCCCCACTGTTGCGCAGGCCATCGTGCCAACAGCAGCGCTTTGCACTGAGAAATACAATGACACCGTGCGAGCCTCCGCCGAGAAGGATAACAAGGT
CGCTTCACTCCTTCCATTGGTCCCTACTGAGGGGATCGCCAAAGTGTTTGACAAGATCAAAATTTAG
mRNA sequenceShow/hide mRNA sequence
CTACATCATTCTTTCCTCTAGTTTTGGCTTTGGAAATGGCGGCTCGGGCTGAGGAGGGGGGGCTGAAGTATTTGGAGTTCGTTCTAAAAGCGGCATTTCGAGCAGCAATG
TGCTTACTCAAGTTTTACGGCTATGCGAAAGACTGGTCCGGTCCGCTGAAGTTCGGCATCGAAGCCATGGAAGGCACTGTGAAGTCCGTTGTTGGTCCTTTGTACAATAA
GTTACACGGCCCTTCGAATGAGGTTCTTAAGTTCATCGATCGCAAGATCCAACGTAGTGGCCTTAAAGACACCGTCACTAGTATTATGAGATCAGTGTATCCCAAGGCGG
AACAGTCCGCAGCTTCAGCATGGCACGCACTGAACCAGTTGCCTGTCTTCCCCACTGTTGCGCAGGCCATCGTGCCAACAGCAGCGCTTTGCACTGAGAAATACAATGAC
ACCGTGCGAGCCTCCGCCGAGAAGGATAACAAGGTCGCTTCACTCCTTCCATTGGTCCCTACTGAGGGGATCGCCAAAGTGTTTGACAAGATCAAAATTTAG
Protein sequenceShow/hide protein sequence
MAARAEEGGLKYLEFVLKAAFRAAMCLLKFYGYAKDWSGPLKFGIEAMEGTVKSVVGPLYNKLHGPSNEVLKFIDRKIQRSGLKDTVTSIMRSVYPKAEQSAASAWHALN
QLPVFPTVAQAIVPTAALCTEKYNDTVRASAEKDNKVASLLPLVPTEGIAKVFDKIKI