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Carg27902 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27902
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUPF0481 protein At3g47200-like
Genome locationCarg_Chr09:11826098..11826328
RNA-Seq ExpressionCarg27902
SyntenyCarg27902
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025180.1 hypothetical protein SDJN02_14003, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-35100Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDGYFVSYCF
        MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDGYFVSYCF
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDGYFVSYCF

XP_022925442.1 UPF0481 protein At3g47200-like [Cucurbita moschata]2.2e-1870.15Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL
        MEK K LA++ F+RRCGL  ED+V ELWDMLEDLQ SYDKLDD+WK KP +FLE+M+LDGC M+ VL
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL

XP_022925443.1 UPF0481 protein At3g47200-like [Cucurbita moschata]6.3e-2995.59Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLD
        MEKKKRLAVQDF+RRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPA+FLELMMLDGCFMVLVL+
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLD

XP_022925444.1 UPF0481 protein At3g47200-like [Cucurbita moschata]9.1e-2072.06Show/hide
Query:  EKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDG
        EK K LA + F++RCGLS EDMV E+WDMLEDLQ SYDKLDDKWKT+PA+FLE+M+LDGCF++ VL G
Subjt:  EKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDG

XP_022925445.1 putative UPF0481 protein At3g02645 [Cucurbita moschata]3.1e-2077.61Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL
        +EKKK LA+ +F+RRCGLSTED+V+EL+ MLEDLQ SYDKLDDKWKT P +FLELM+LDGCFMVLVL
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL

TrEMBL top hitse value%identityAlignment
A0A6J1EBQ1 UPF0481 protein At3g47200-like1.1e-1870.15Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL
        MEK K LA++ F+RRCGL  ED+V ELWDMLEDLQ SYDKLDD+WK KP +FLE+M+LDGC M+ VL
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL

A0A6J1EC69 UPF0481 protein At3g47200-like4.4e-2072.06Show/hide
Query:  EKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDG
        EK K LA + F++RCGLS EDMV E+WDMLEDLQ SYDKLDDKWKT+PA+FLE+M+LDGCF++ VL G
Subjt:  EKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDG

A0A6J1ECA1 UPF0481 protein At3g47200-like4.2e-1562.69Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL
        MEK+K L  +DF+R  GL TED+V E+WDMLEDLQ SYDKL D+WKTKP +FLE+M++DG F++  L
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL

A0A6J1EF72 UPF0481 protein At3g47200-like3.0e-2995.59Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLD
        MEKKKRLAVQDF+RRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPA+FLELMMLDGCFMVLVL+
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLD

A0A6J1EI01 putative UPF0481 protein At3g026451.5e-2077.61Show/hide
Query:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL
        +EKKK LA+ +F+RRCGLSTED+V+EL+ MLEDLQ SYDKLDDKWKT P +FLELM+LDGCFMVLVL
Subjt:  MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGAAACGTTTAGCAGTTCAAGACTTTCAAAGGCGCTGCGGATTGTCCACTGAAGACATGGTGACTGAGCTGTGGGACATGTTGGAAGATTTGCAGACATC
GTATGATAAACTTGATGATAAATGGAAAACAAAACCAGCCGAATTTTTGGAGCTCATGATGTTGGATGGTTGTTTCATGGTGCTTGTCTTGGATGGTTATTTCGTATCTT
ATTGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGAAACGTTTAGCAGTTCAAGACTTTCAAAGGCGCTGCGGATTGTCCACTGAAGACATGGTGACTGAGCTGTGGGACATGTTGGAAGATTTGCAGACATC
GTATGATAAACTTGATGATAAATGGAAAACAAAACCAGCCGAATTTTTGGAGCTCATGATGTTGGATGGTTGTTTCATGGTGCTTGTCTTGGATGGTTATTTCGTATCTT
ATTGCTTCTAA
Protein sequenceShow/hide protein sequence
MEKKKRLAVQDFQRRCGLSTEDMVTELWDMLEDLQTSYDKLDDKWKTKPAEFLELMMLDGCFMVLVLDGYFVSYCF