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Carg27910 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27910
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationCarg_Chr20:11543735..11544202
RNA-Seq ExpressionCarg27910
SyntenyCarg27910
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605242.1 hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sororia]6.7e-5473.89Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PATFICNSDDMDF+D V AV DDD LQLGHLYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQK--GSGGGRKFRAKLSAIPE
        +KAG GG+EK GSRR    P+ F +EE RK P + ++K  GSGG RKF AKL AIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQK--GSGGGRKFRAKLSAIPE

XP_022928071.1 uncharacterized protein LOC111434966 [Cucurbita moschata]2.7e-79100Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

XP_022971678.1 uncharacterized protein LOC111470350 [Cucurbita maxima]1.3e-7697.42Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        IKAGAGGTEKSGSRRTAVSP+AFSDEEFRKPP R LQKGSG GRKFRAKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

XP_023512544.1 uncharacterized protein LOC111777254 [Cucurbita pepo subsp. pepo]2.3e-7899.35Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPP RSLQKGSGGGRKFRAKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

XP_038902080.1 uncharacterized protein LOC120088720 [Benincasa hispida]7.9e-6381.29Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGIC+SSD++NVATAKLILTDGTL+EFSYPVKVS++L KHPA+FICNSD+MDFDD VYAV DDD LQLG LYFALPLDRLNQPL  EEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        +KAG GGTEK GSRRTA+SP+ FSDEEFRK P + L+KGSG  RKF AKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

TrEMBL top hitse value%identityAlignment
A0A6J1D8L2 uncharacterized protein LOC1110179249.5e-5476.13Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDS NVATAKLILTDGTLLE+SYPVKVS++L K PA+FICNSD+MDFDD V A+ D D LQLG LYFALPLDRLNQPLH EEMAALAVKAS+AL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        +KAG    EK GSRRTA+SP  FSDEEF K      +KGSG  RKF AKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

A0A6J1EJ90 uncharacterized protein LOC1114349661.3e-79100Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

A0A6J1G7I2 uncharacterized protein LOC1114514546.1e-5373.25Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++LHK PA+FICNSDDMDF+D V AV DDD LQLG LYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQK--GSGGGRKFRAKLSAIPE
        +KAG GG+EK GSRR  V    FS+EE RK P + ++K  GSGG RKF AKL AIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQK--GSGGGRKFRAKLSAIPE

A0A6J1I7K7 uncharacterized protein LOC1114703506.1e-7797.42Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE
        IKAGAGGTEKSGSRRTAVSP+AFSDEEFRKPP R LQKGSG GRKFRAKLSAIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE

A0A6J1L0H7 uncharacterized protein LOC1114999285.2e-5271.97Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGICISSDS NV+TAKLIL+DGTLLE+SYPVKVS++L K PA+FICNSDDMDF+D V AV D+D LQLG LYFALPL++LN+PLH E+MAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKG--SGGGRKFRAKLSAIPE
        +KAG GG+EK GSRR    P+ FS+EE RK P R ++KG  +GG RKF AKL AIPE
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKG--SGGGRKFRAKLSAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein1.0e-1234.07Show/hide
Query:  MGICISSDS----VNVATAKLILTDGTLLEFSYPVKVSFLLHKHPAT----------FICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHP
        MG+C+S +      +  TAK++  +G L E+  PV  S +L     +          F+CNSD + +DD + A+  D+ LQ   +YF LP+ +    L  
Subjt:  MGICISSDS----VNVATAKLILTDGTLLEFSYPVKVSFLLHKHPAT----------FICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHP

Query:  EEMAALAVKASSALIKAGAGGTEKSGSRRTAVSPL
         +MAALAVKAS A+ K  A G +    R   +SP+
Subjt:  EEMAALAVKASSALIKAGAGGTEKSGSRRTAVSPL

AT2G23690.1 unknown protein2.6e-3552.76Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGIC S +S  VATAKLIL DG ++EF+ PVKV ++L K+P  FICNSDDMDFD+ V A+  D+  QLG LYFALPL  L+  L  EEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAG-GTEKSGSRRTAVSPLAFSDEEF-------RKPPGRSLQKGSGGGRKFRAKLSAIPE
        +++G   G +K   RR  VSP+ FS               G+    G  G RK+ AKLS I E
Subjt:  IKAGAG-GTEKSGSRRTAVSPLAFSDEEF-------RKPPGRSLQKGSGGGRKFRAKLSAIPE

AT3G50800.1 unknown protein1.6e-3251.52Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MG C S +S    TAKLIL DGTL EFS PVKV  +L K+P +F+CNSDDMDFDDAV AV   + L+ G LYF LPL  LN PL  +EMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQ------KGSGGG----RKFRAKLSAIPE
         K+G GG             L+++DE+  +   R ++      +G GGG    RKF A+LS+I E
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQ------KGSGGG----RKFRAKLSAIPE

AT4G37240.1 unknown protein1.5e-3551.45Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MGIC SS+S  VATAKLIL DG ++EF+ PVKV ++L K+P  FICNSDDMDFDDAV A+  D+ LQLG +YFALPL  L QPL  EEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPG----------RSLQKGSGGG--------RKFRAKLSAIPE
        ++ G G     G RR  V P+       R   G          R ++ G GGG        + + A+LS I E
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPG----------RSLQKGSGGG--------RKFRAKLSAIPE

AT5G66580.1 unknown protein4.2e-3049.38Show/hide
Query:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL
        MG C S +S+   +AKLIL DGTL EFS PVKV  +L K+P +F+CNSD+MDFDDAV AV  ++ L+ G LYF LPL  LN PL  EEMAALAVKASSAL
Subjt:  MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSAL

Query:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGG-------RKFRAKLSAIPE
         K+G  G        T       S++ ++K     ++   GGG       R+F A LS I E
Subjt:  IKAGAGGTEKSGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGG-------RKFRAKLSAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCATTTCCTCCGATTCCGTGAACGTGGCCACCGCCAAGCTGATTCTAACCGACGGCACGCTGCTCGAGTTCTCCTACCCGGTCAAGGTCTCCTTTCTCCT
ACACAAACACCCCGCCACTTTCATTTGCAACTCCGACGACATGGACTTCGACGACGCCGTTTACGCCGTCCATGACGACGACCACCTCCAACTCGGCCACCTTTACTTTG
CCCTGCCCTTGGACAGGCTCAACCAGCCGCTGCACCCGGAGGAGATGGCCGCACTCGCCGTCAAGGCCAGCTCCGCGCTTATCAAGGCCGGCGCCGGAGGGACTGAAAAA
TCTGGATCTCGACGCACGGCGGTCTCCCCTCTCGCGTTTTCCGACGAGGAGTTTAGGAAGCCTCCGGGGAGGAGCTTGCAGAAGGGGAGTGGTGGGGGTAGAAAATTTAG
GGCGAAGTTGAGTGCAATTCCGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCATTTCCTCCGATTCCGTGAACGTGGCCACCGCCAAGCTGATTCTAACCGACGGCACGCTGCTCGAGTTCTCCTACCCGGTCAAGGTCTCCTTTCTCCT
ACACAAACACCCCGCCACTTTCATTTGCAACTCCGACGACATGGACTTCGACGACGCCGTTTACGCCGTCCATGACGACGACCACCTCCAACTCGGCCACCTTTACTTTG
CCCTGCCCTTGGACAGGCTCAACCAGCCGCTGCACCCGGAGGAGATGGCCGCACTCGCCGTCAAGGCCAGCTCCGCGCTTATCAAGGCCGGCGCCGGAGGGACTGAAAAA
TCTGGATCTCGACGCACGGCGGTCTCCCCTCTCGCGTTTTCCGACGAGGAGTTTAGGAAGCCTCCGGGGAGGAGCTTGCAGAAGGGGAGTGGTGGGGGTAGAAAATTTAG
GGCGAAGTTGAGTGCAATTCCGGAATAA
Protein sequenceShow/hide protein sequence
MGICISSDSVNVATAKLILTDGTLLEFSYPVKVSFLLHKHPATFICNSDDMDFDDAVYAVHDDDHLQLGHLYFALPLDRLNQPLHPEEMAALAVKASSALIKAGAGGTEK
SGSRRTAVSPLAFSDEEFRKPPGRSLQKGSGGGRKFRAKLSAIPE