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Carg27913 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27913
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4228 domain-containing protein
Genome locationCarg_Chr20:11535667..11536050
RNA-Seq ExpressionCarg27913
SyntenyCarg27913
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045798.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]2.7e-3281.11Show/hide
Query:  MDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        MDGF++EFSDPIKASKITS NPN  LCNS++M IGS VPSLS DENLQ+GQIYFLLPLSLA SPLSLPDLCNFAIKASSAL  + SP FR
Subjt:  MDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

KAE8651930.1 hypothetical protein Csa_006329 [Cucumis sativus]3.3e-4372.73Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQP-----NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPL
        MGVCAST T  ++ NPK G++  +QQQ      NLDSIKV+HMDGF++EFSDPIKASKITS NPN  LCNS++M IGS VPSLS DENLQ+GQIYFLLPL
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQP-----NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPL

Query:  SLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        SLA SPLSLPDLCNFAIKASSAL  +QS  FR
Subjt:  SLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

KAG6571421.1 hypothetical protein SDJN03_30336, partial [Cucurbita argyrosperma subsp. sororia]5.3e-65100Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS
        MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS

Query:  PLSLPDLCNFAIKASSALPTLQSPCFR
        PLSLPDLCNFAIKASSALPTLQSPCFR
Subjt:  PLSLPDLCNFAIKASSALPTLQSPCFR

XP_008457799.2 PREDICTED: uncharacterized protein LOC103497401 [Cucumis melo]2.0e-4372.59Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQP--------NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFL
        MGVCAST T  I+ NPK G++  +QQQ         NLDSIKVIHMDGF++EFSDPIKASKITS NPN  LCNS++M IGS VPSLS DENLQ+GQIYFL
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQP--------NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFL

Query:  LPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        LPLSLA SPLSLPDLCNFAIKASSAL  + SP FR
Subjt:  LPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

XP_022158695.1 uncharacterized protein LOC111025158 [Momordica charantia]6.5e-3163.03Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQPNLDS-IKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQ
        MGVC ST T   S   +RG+ + Q +  +  S IK++HMDG ++EF+DPIKASKI S NPN LLCNS++M IGS VP+LS DE+LQLGQIYFL+P   A 
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQPNLDS-IKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQ

Query:  SPLSLPDLCNFAIKASSAL
        +PLSLPDLCN AIKASSAL
Subjt:  SPLSLPDLCNFAIKASSAL

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ9 Uncharacterized protein1.6e-4372.73Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQP-----NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPL
        MGVCAST T  ++ NPK G++  +QQQ      NLDSIKV+HMDGF++EFSDPIKASKITS NPN  LCNS++M IGS VPSLS DENLQ+GQIYFLLPL
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQP-----NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPL

Query:  SLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        SLA SPLSLPDLCNFAIKASSAL  +QS  FR
Subjt:  SLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

A0A1S3C6C0 uncharacterized protein LOC1034974019.5e-4472.59Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQP--------NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFL
        MGVCAST T  I+ NPK G++  +QQQ         NLDSIKVIHMDGF++EFSDPIKASKITS NPN  LCNS++M IGS VPSLS DENLQ+GQIYFL
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQP--------NLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFL

Query:  LPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        LPLSLA SPLSLPDLCNFAIKASSAL  + SP FR
Subjt:  LPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

A0A3S3P874 Uncharacterized protein1.1e-2352.89Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS
        MG CAS  T              +Q++    + KVIHMDG +QEF  PIKA  I S NP   LC+S+ M + S VP +  DE LQLGQIYFL+PL  +QS
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS

Query:  PLSLPDLCNFAIKASSALPTL
        PLSLPDLC  AIKAS+ALP+L
Subjt:  PLSLPDLCNFAIKASSALPTL

A0A5A7TSG7 DUF4228 domain-containing protein1.3e-3281.11Show/hide
Query:  MDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        MDGF++EFSDPIKASKITS NPN  LCNS++M IGS VPSLS DENLQ+GQIYFLLPLSLA SPLSLPDLCNFAIKASSAL  + SP FR
Subjt:  MDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

A0A6J1DWJ0 uncharacterized protein LOC1110251583.2e-3163.03Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQPNLDS-IKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQ
        MGVC ST T   S   +RG+ + Q +  +  S IK++HMDG ++EF+DPIKASKI S NPN LLCNS++M IGS VP+LS DE+LQLGQIYFL+P   A 
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQPNLDS-IKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQ

Query:  SPLSLPDLCNFAIKASSAL
        +PLSLPDLCN AIKASSAL
Subjt:  SPLSLPDLCNFAIKASSAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein8.0e-1134.74Show/hide
Query:  KVIHMDGFVQEFSDPIKASKI----------TSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSAL
        K++ ++G ++E+  P+ AS++          +S + +  LCNSD ++    +P++  DE LQ  QIYF+LP+S  Q  LS  D+   A+KAS A+
Subjt:  KVIHMDGFVQEFSDPIKASKI----------TSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSAL

AT2G23690.1 unknown protein2.0e-1441.49Show/hide
Query:  KVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR
        K+I  DG + EF+ P+K   +   NP   +CNSD+M   + V ++S DE  QLGQ+YF LPLS     L   ++   A+KASSAL      C R
Subjt:  KVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSALPTLQSPCFR

AT3G50800.1 unknown protein2.3e-1340.91Show/hide
Query:  DSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSAL
        ++ K+I  DG +QEFS P+K  +I   NP   +CNSD+M     V ++   E+L+ G++YF+LPL+    PL   ++   A+KASSAL
Subjt:  DSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSAL

AT4G37240.1 unknown protein4.1e-1535.59Show/hide
Query:  MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS
        MG+C+S+ +  ++                  + K+I  DG + EF++P+K   +    P   +CNSD+M     V ++S DE LQLGQIYF LPL   + 
Subjt:  MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQS

Query:  PLSLPDLCNFAIKASSAL
        PL   ++   A+KASSAL
Subjt:  PLSLPDLCNFAIKASSAL

AT5G66580.1 unknown protein4.9e-1645.45Show/hide
Query:  DSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSAL
        DS K+I +DG +QEFS P+K  +I   NP   +CNSDEM     V +++ +E L+ GQ+YF+LPL+    PL   ++   A+KASSAL
Subjt:  DSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNFAIKASSAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTTTGCGCTTCGACGCACACAGCAACGATATCAGCGAATCCGAAGCGCGGAATGAGACTGCATCAACAGCAGCAACCAAATCTGGATTCGATCAAGGTGATTCA
CATGGACGGCTTCGTCCAGGAGTTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCACAACCCTAACCTCCTCCTCTGCAACTCCGACGAAATGTTCATCGGCAGCC
GCGTCCCCTCCCTCTCCCCCGACGAAAACCTCCAACTCGGCCAAATCTACTTCCTCCTCCCGCTCTCCCTCGCGCAATCGCCTCTCTCCCTCCCCGATCTCTGCAATTTC
GCCATTAAGGCCTCCTCTGCTCTTCCCACGCTTCAATCTCCCTGCTTCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGTTTGCGCTTCGACGCACACAGCAACGATATCAGCGAATCCGAAGCGCGGAATGAGACTGCATCAACAGCAGCAACCAAATCTGGATTCGATCAAGGTGATTCA
CATGGACGGCTTCGTCCAGGAGTTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCACAACCCTAACCTCCTCCTCTGCAACTCCGACGAAATGTTCATCGGCAGCC
GCGTCCCCTCCCTCTCCCCCGACGAAAACCTCCAACTCGGCCAAATCTACTTCCTCCTCCCGCTCTCCCTCGCGCAATCGCCTCTCTCCCTCCCCGATCTCTGCAATTTC
GCCATTAAGGCCTCCTCTGCTCTTCCCACGCTTCAATCTCCCTGCTTCAGGTAG
Protein sequenceShow/hide protein sequence
MGVCASTHTATISANPKRGMRLHQQQQPNLDSIKVIHMDGFVQEFSDPIKASKITSHNPNLLLCNSDEMFIGSRVPSLSPDENLQLGQIYFLLPLSLAQSPLSLPDLCNF
AIKASSALPTLQSPCFR