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Carg27965 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27965
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr01:6566562..6567041
RNA-Seq ExpressionCarg27965
SyntenyCarg27965
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607589.1 hypothetical protein SDJN03_00931, partial [Cucurbita argyrosperma subsp. sororia]6.8e-7899.37Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLE+DEETEAAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

KAG7037212.1 hypothetical protein SDJN02_00835, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-78100Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

XP_022932064.1 uncharacterized protein LOC111438391 [Cucurbita moschata]4.2e-7596.23Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLE+DEET+AAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEI +L PS+TSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

XP_022972924.1 uncharacterized protein LOC111471431 [Cucurbita maxima]1.1e-6790.12Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETE----AAAAEKMDVLWENLNEDLSR
        MAVEDDF+FPTAFDSFTRCSIDSPPLWR SPAASPISDSNFRDTTAHT+R DRFA VTFTSSL RRR LE+DEE E    AAAAEKMDVLWENLNEDLSR
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETE----AAAAEKMDVLWENLNEDLSR

Query:  NRRSRLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS
        NRRSRLMKSAEIESVEI EL PSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSR+NLETRS
Subjt:  NRRSRLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS

XP_023521937.1 uncharacterized protein LOC111785778 [Cucurbita pepo subsp. pepo]2.1e-7495.6Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPT FDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRR+L +DEETEAAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEIPEL PSE SRSTATRRKKTTTGIVKVLKKLFL+QNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

TrEMBL top hitse value%identityAlignment
A0A5A7V6B2 Uncharacterized protein1.7e-3758.33Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPIS-------DSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKL-------ETDEETEAAAAEKMDVL
        MAVEDDFSFPTA + F RC IDSPPLWR SP+ASPIS       D NFRDT +  + ++RF + +F     RRR L       E +EE E A AEKMDVL
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPIS-------DSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKL-------ETDEETEAAAAEKMDVL

Query:  WENLNEDLSRNRRSRLMKSAEIESVEI-------PELGPSETSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS
        WEN NE+LSR+RRSRLMK+AE+E  EI        EL   ETS + ATRRK T  T  VKVLKKLFLM + SRRNL+TRS
Subjt:  WENLNEDLSRNRRSRLMKSAEIESVEI-------PELGPSETSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS

A0A6J1EVZ5 uncharacterized protein LOC1114383912.0e-7596.23Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
        MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLE+DEET+AAAAEKMDVLWENLNEDLSRNRRS
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
        RLMKSAEIESVEI +L PS+TSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA
Subjt:  RLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA

A0A6J1EX19 uncharacterized protein LOC1114390324.0e-3958.1Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETD------EETEAAAAEKMDVLW
        MAVEDDFSFPTA + ++RC IDSPPLWR SP ASPI       S+ +FRD      ++DRFA+V F++SL RRR+  +D      EE E  AAEKMDVLW
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETD------EETEAAAAEKMDVLW

Query:  ENLNEDLSRNRRSRLMKSAEIESVEI-------PELGPSETSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS
        EN NE+LSR+ RSRLMK+AE+E +EI        EL  SETS + ATRRK T  T  VK LKKLFL+ N SRRNL+TRS
Subjt:  ENLNEDLSRNRRSRLMKSAEIESVEI-------PELGPSETSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS

A0A6J1ID03 uncharacterized protein LOC1114714315.3e-6890.12Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETE----AAAAEKMDVLWENLNEDLSR
        MAVEDDF+FPTAFDSFTRCSIDSPPLWR SPAASPISDSNFRDTTAHT+R DRFA VTFTSSL RRR LE+DEE E    AAAAEKMDVLWENLNEDLSR
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETE----AAAAEKMDVLWENLNEDLSR

Query:  NRRSRLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS
        NRRSRLMKSAEIESVEI EL PSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSR+NLETRS
Subjt:  NRRSRLMKSAEIESVEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRS

A0A6J1INL4 uncharacterized protein LOC1114771616.8e-3958.43Show/hide
Query:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETD-----EETEAAAAEKMDVLWE
        MAVEDDFSFPTA + ++RC IDSPPLWR SPAASPI       S+ +FRD      ++D FA+V F++SL RRR+  +D     EE E  AAEKMDVLWE
Subjt:  MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPI-------SDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETD-----EETEAAAAEKMDVLWE

Query:  NLNEDLSRNRRSRLMKSAEIESVEI-------PELGPSETSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS
        N NE+LSR+ RSRLMK+AE+E +EI        EL  SETS + ATRRK T  T  VK LKKLFL+ N SRRNL+TRS
Subjt:  NLNEDLSRNRRSRLMKSAEIESVEI-------PELGPSETSRSTATRRKKT-TTGIVKVLKKLFLMQNTSRRNLETRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71910.1 unknown protein8.2e-0529.27Show/hide
Query:  DDFSFPT--AFDSFTRCSIDSPPLWRASPAAS-PISDSNFRDTTAHTDRT-DRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS
        ++F+FP+  + DS     +DSPPLW+ SP  S    D +F        +  D     +F+    R R ++  EE      EKMD+LWE+LNE+L    +S
Subjt:  DDFSFPT--AFDSFTRCSIDSPPLWRASPAAS-PISDSNFRDTTAHTDRT-DRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRS

Query:  RLMKSAEIESVEIPELGPSETS--------RSTATRRKKTTTGI---VKVLKKLFLMQNTSRRN
          +        +   L P E+S        + +   +KKT   +   ++VLKKL +++++S+R+
Subjt:  RLMKSAEIESVEIPELGPSETS--------RSTATRRKKTTTGI---VKVLKKLFLMQNTSRRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGAAGACGACTTCAGTTTCCCCACCGCCTTCGACTCCTTCACCCGCTGCAGCATCGATTCCCCGCCTCTCTGGCGCGCCTCTCCCGCCGCATCTCCCATTTC
CGATTCCAACTTCAGAGACACCACGGCCCATACTGACAGGACCGATCGCTTCGCCGCCGTCACATTTACGTCCTCCTTGCACAGGAGGAGGAAACTCGAGACCGACGAGG
AGACGGAGGCCGCGGCGGCGGAGAAGATGGATGTGCTCTGGGAGAATCTCAACGAGGACTTATCGAGGAATCGAAGATCGAGGTTGATGAAATCGGCGGAGATTGAATCG
GTTGAGATACCGGAATTGGGTCCGTCGGAAACGTCGAGAAGCACCGCGACGAGGAGGAAGAAGACGACGACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCA
GAACACTTCCCGCCGGAATCTGGAAACTCGATCAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTGAAGACGACTTCAGTTTCCCCACCGCCTTCGACTCCTTCACCCGCTGCAGCATCGATTCCCCGCCTCTCTGGCGCGCCTCTCCCGCCGCATCTCCCATTTC
CGATTCCAACTTCAGAGACACCACGGCCCATACTGACAGGACCGATCGCTTCGCCGCCGTCACATTTACGTCCTCCTTGCACAGGAGGAGGAAACTCGAGACCGACGAGG
AGACGGAGGCCGCGGCGGCGGAGAAGATGGATGTGCTCTGGGAGAATCTCAACGAGGACTTATCGAGGAATCGAAGATCGAGGTTGATGAAATCGGCGGAGATTGAATCG
GTTGAGATACCGGAATTGGGTCCGTCGGAAACGTCGAGAAGCACCGCGACGAGGAGGAAGAAGACGACGACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCA
GAACACTTCCCGCCGGAATCTGGAAACTCGATCAGCCTGA
Protein sequenceShow/hide protein sequence
MAVEDDFSFPTAFDSFTRCSIDSPPLWRASPAASPISDSNFRDTTAHTDRTDRFAAVTFTSSLHRRRKLETDEETEAAAAEKMDVLWENLNEDLSRNRRSRLMKSAEIES
VEIPELGPSETSRSTATRRKKTTTGIVKVLKKLFLMQNTSRRNLETRSA