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Carg27991 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27991
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein FLX-like 3
Genome locationCarg_Chr15:4870774..4871727
RNA-Seq ExpressionCarg27991
SyntenyCarg27991
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
InterPro domainsIPR040353 - FLC EXPRESSOR/FLX-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579193.1 RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia]4.2e-38100Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
KAG7016705.1 Protein FLX-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-44100Show/hide
Query:  MIELIVHNVFRRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        MIELIVHNVFRRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
Subjt:  MIELIVHNVFRRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
XP_022938808.1 protein FLX-like 3 [Cucurbita moschata]4.2e-38100Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
XP_022971772.1 protein FLX-like 3 [Cucurbita maxima]2.4e-3390.7Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKK+NEEQ EQKQ MEKNLVSMAREIEKLRAEKLN+ERARGLGAEGYGIL RSPEMRYAGG YGN+YG+SWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
XP_023550800.1 protein FLX-like 3 [Cucurbita pepo subsp. pepo]9.3e-3898.84Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPE+RYAGGPYGNNYGNSWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
TrEMBL top hitse value%identityAlignment
A0A6J1E1V0 protein FLX-like 31.1e-3390.7Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKK+NEEQ EQKQAMEKNLVSMAREIEKLRAEKLN+ERARGLGAEGYGIL RSPEMRYAGG YGN+YG+SWAPYEKR RR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
A0A6J1FJY5 protein FLX-like 32.0e-38100Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
A0A6J1H8N2 protein FLX-like 31.1e-3390.7Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKK+NEEQ EQKQ MEKNLVSMAREIEKLRAEKLN+ERARGLGAEGYGIL RSPEMRYAGG YGN+YG+SWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
A0A6J1I2W7 protein FLX-like 31.1e-3390.7Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKK+NEEQ EQKQ MEKNLVSMAREIEKLRAEKLN+ERARGLGAEGYGIL RSPEMRYAGG YGN+YG+SWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
A0A6J1K060 protein FLX-like 32.0e-38100Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
        RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR
SwissProt top hitse value%identityAlignment
Q84TD8 Protein FLX-like 28.3e-0543.06Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNN
        R  Y+YEKK   +  E  QAMEKN ++MARE+EKL+A+ +N                 +   R AGGPYGNN
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNN
Q9C717 Protein FLX-like 32.8e-0546.67Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGN
        R A EYEKK   E  EQ+Q MEKN+VSMARE+EKLRAE   ++      +  +G           GG YG NY N
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGN
Arabidopsis top hitse value%identityAlignment
AT1G55170.1 unknown protein2.0e-0646.67Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGN
        R A EYEKK   E  EQ+Q MEKN+VSMARE+EKLRAE   ++      +  +G           GG YG NY N
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGN
AT1G67170.1 unknown protein5.9e-0643.06Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNN
        R  Y+YEKK   +  E  QAMEKN ++MARE+EKL+A+ +N                 +   R AGGPYGNN
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNN
AT3G14750.1 unknown protein8.5e-0542.5Show/hide
Query:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERAR-------GLGAEGYGILKRSPEMRYAGGPYGNNY
        R A +YEKK   E  E  + ME  LV+MARE+EKLRAE  N E +          G   YG    +PE  Y   PY  NY
Subjt:  RRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERAR-------GLGAEGYGILKRSPEMRYAGGPYGNNY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAATTGATCGTGCACAATGTTTTTAGGAGGGCTTATGAATATGAAAAGAAATCCAATGAAGAACAAAATGAACAAAAGCAAGCAATGGAGAAGAATCTTGTTTC
AATGGCTCGTGAAATAGAGAAACTGCGAGCAGAGAAGCTCAACTTAGAGAGAGCACGGGGATTAGGTGCTGAGGGTTATGGGATCTTGAAAAGAAGTCCTGAAATGAGAT
ATGCAGGTGGTCCATATGGTAATAACTATGGTAATTCATGGGCACCATATGAGAAGCGTAGCCGACGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAATTGATCGTGCACAATGTTTTTAGGAGGGCTTATGAATATGAAAAGAAATCCAATGAAGAACAAAATGAACAAAAGCAAGCAATGGAGAAGAATCTTGTTTC
AATGGCTCGTGAAATAGAGAAACTGCGAGCAGAGAAGCTCAACTTAGAGAGAGCACGGGGATTAGGTGCTGAGGGTTATGGGATCTTGAAAAGAAGTCCTGAAATGAGAT
ATGCAGGTGGTCCATATGGTAATAACTATGGTAATTCATGGGCACCATATGAGAAGCGTAGCCGACGTTAAGTTTCGATCTTTCCCTTAGATGTCCTTCATTGGAGTTCA
ATTTCTGGTTTAACATCTTTACTTTCTTTGGAGAAGCTGCTTTTGAGAATTACCATTATCATCACGGTGTGAAATATCAACTAGTTAAGATTGTAACTGTAGTACATTTT
ACTGTGACTAAAGTTATACTTTCATTGCATTATACTGTGTCATTTTATGCTAGTTTATTTGAAGAATACTGAAAGACTACTGGCTGGGAAAAACATTTTTTGACGTTTCT
CAACCAATCATTGAAACAAGTCTTTTTAAAAGAGAGAGAGAGGGAGAGGATATGATGTAAGCTCTGCAGAATTAGTAGAATAAATGTTGGTGGAGAAGTTTGATTCTGGT
GACAAGTACTGTGATGAAACATACTGTGATTCTCATTCCCATATTCAAATTTTCCTAAATATAGGCTTGTATTGAGGGATCCAGCTCTTTGGCTTATGGAGATGCTTTAT
ATTGTTTTGGTTGATTATGCTTTATACGATTGAGTTGATTACAACAGGCACTTCTTT
Protein sequenceShow/hide protein sequence
MIELIVHNVFRRAYEYEKKSNEEQNEQKQAMEKNLVSMAREIEKLRAEKLNLERARGLGAEGYGILKRSPEMRYAGGPYGNNYGNSWAPYEKRSRR