; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg27993 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg27993
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionconserved peptide upstream open reading frame 53
Genome locationCarg_Chr15:4876741..4877526
RNA-Seq ExpressionCarg27993
SyntenyCarg27993
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2664121.1 hypothetical protein I3760_16G064500 [Carya illinoinensis]2.9e-1968.54Show/hide
Query:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSAGFDL +IGALL+L  FS+++ S L +   CCM+LC F+Q LNLV+ SVSMR RPKRTCSGVKCFGAFHIKRF  F L LF RGG T
Subjt:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
KAG6579195.1 hypothetical protein SDJN03_23643, partial [Cucurbita argyrosperma subsp. sororia]1.4e-37100Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
KAG6672509.1 hypothetical protein I3842_16G060900 [Carya illinoinensis]6.6e-1968.54Show/hide
Query:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSAGFDL +IGALL+L  FS ++ S L +   CCM+LC F+Q LNLV+ SVSMR RPKRTCSGVKCFGAFHIKRF  F L LF RGG T
Subjt:  MSAGFDLAVIGALLQL-CFSSSSSSLLLS---CCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
KGN45959.1 hypothetical protein Csa_005610 [Cucumis sativus]9.8e-2381.18Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSAGFDLAVIGALLQLCF    SSLLL    IL  FKQSLNL+F SVSMR RPKRTCSGVKCFGAFHIKRF SF+LLLFR+GGFT
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
OAY31310.1 hypothetical protein MANES_14G101800v8 [Manihot esculenta]2.9e-1964.44Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSA FDLA+IGALL+LCF  S+SS L  CC     M+LCCF+QSL+L FP++SMR R KRTCSGV+CFG FHIKRF  F L L+ RG  T
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
TrEMBL top hitse value%identityAlignment
A0A0A0KAV1 Uncharacterized protein4.7e-2381.18Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSAGFDLAVIGALLQLCF    SSLLL    IL  FKQSLNL+F SVSMR RPKRTCSGVKCFGAFHIKRF SF+LLLFR+GGFT
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
A0A0D2W3V4 Uncharacterized protein3.3e-1661.36Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MS  FDLA+IGA LQLCFSSS+   S L +   + LC ++Q LNLV P VSMR RPK+TCSGV CFG FHIK+   F LLLF RG +T
Subjt:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
A0A2C9UKK3 Uncharacterized protein1.4e-1964.44Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MSA FDLA+IGALL+LCF  S+SS L  CC     M+LCCF+QSL+L FP++SMR R KRTCSGV+CFG FHIKRF  F L L+ RG  T
Subjt:  MSAGFDLAVIGALLQLCFSSSSSSLLLSCC-----MILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
A0A7J8T161 Uncharacterized protein6.6e-1762.5Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MS  FDLA+IGA LQLCFSSS+   S L +   + LC ++Q LNLV PSVSMR RPK+TCSGV CFG FHIK+   F LLLF RG +T
Subjt:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
A0A7J8VXR7 Uncharacterized protein6.6e-1762.5Show/hide
Query:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
        MS  FDLA+IGA LQLCFSSS+   S L +   + LC ++Q LNLV PSVSMR RPK+TCSGV CFG FHIK+   F LLLF RG +T
Subjt:  MSAGFDLAVIGALLQLCFSSSS---SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25472.1 conserved peptide upstream open reading frame 542.0e-0543.82Show/hide
Query:  MSAGFDLAVIGALLQLCF-----SSSSSSLL---LSCCMIL----CCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILL
        MSA  + A I +L  + F     SSSSSS+L   LS   +L     C +Q L L  PS+SM  R KRTCSGV+ FG FH K+   F ++
Subjt:  MSAGFDLAVIGALLQLCF-----SSSSSSLL---LSCCMIL----CCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILL
AT1G68552.1 conserved peptide upstream open reading frame 537.0e-1152.33Show/hide
Query:  MSAGFDLAVIGALLQL-----CFSSSSSSLLLSC---CMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIK--RFSSFIL
        MSAGF+  VI +L+ +       SS SSS L SC    +  CC KQ L L  PS+SMR RPKRTCS V+ FG FHIK  +FS FI+
Subjt:  MSAGFDLAVIGALLQL-----CFSSSSSSLLLSC---CMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIK--RFSSFIL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAA
GCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTCCT
TCATTCTCTTGCTCTTCAGAAGAGGGGGCTTCACATAA
mRNA sequenceShow/hide mRNA sequence
TTAAATTTTGGTTATTTTTATATACCCAATTCTCGCCTTCTTCCTCTGTTGTCTGTGAATGGAGATTTAGGGAAATTTAGGGTTTGAAAGGCTTCTTCTGTCTGTTTCTC
TTGCTCTGCAACTTGAGCGCCTTTCTGAGCTTCATTTCGCTGTTTTCCTGCACACGCCGTAGGCATACATTGATAAGTTTAACGCTTCCTTTGTCACGTTTTAAGCAAAG
CCCAACCATAGCCATTGATTTCTCATCCTATCTCTTCAATCCTTCCCTTTTCTGTACTCTCTTCCCTTTTATTTATTATCTTCGTTTTGCTTATTCTTCCTCTGTTTCAA
AGGCAGACGGAGGGAGGGCTTCTTTTTTCCTGTTTTGTTTTCTGATTTTCTCTGAGGTTTGAGGAAGAGGAAGGCAGAGTTCTAGGAGTTGAGGAGCTGCAGATTTATGT
CGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAG
AGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTCCTTCAT
TCTCTTGCTCTTCAGAAGAGGGGGCTTCACATAA
Protein sequenceShow/hide protein sequence
MSAGFDLAVIGALLQLCFSSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSSFILLLFRRGGFT