; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28010 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28010
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transport factor 2 family protein
Genome locationCarg_Chr17:2773854..2775609
RNA-Seq ExpressionCarg28010
SyntenyCarg28010
Gene Ontology termsNA
InterPro domainsIPR018790 - Protein of unknown function DUF2358


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575195.1 hypothetical protein SDJN03_25834, partial [Cucurbita argyrosperma subsp. sororia]8.0e-10599.47Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDK NMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

KAG7013759.1 hypothetical protein SDJN02_23926 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-108100Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSGMFNL
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSGMFNL
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSGMFNL

XP_022959200.1 uncharacterized protein LOC111460260 [Cucurbita moschata]6.3e-10296.83Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSLQTSLN IRPNRPLKIC IRCQG+NPAT SPK RESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

XP_023006651.1 uncharacterized protein LOC111499312 [Cucurbita maxima]3.4e-10397.88Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSL+TSLN IRPNRPLKICTIRCQGDNPATDSPK RESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

XP_023547468.1 uncharacterized protein LOC111806404 [Cucurbita pepo subsp. pepo]2.0e-10397.88Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSLQTSLN IRPNRPLKICTIRCQGDNPATDSPK +ESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

TrEMBL top hitse value%identityAlignment
A0A0A0K7I1 Uncharacterized protein4.3e-8883.6Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATI  FQ  +SL TSLN IRPN  L+IC I CQG+NP TDSP  +ESKPENAVLKVAWYGSELLGIAAS+LRPP DV+TP+RAQELT DVSG+I RP+I
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIK+DF RSYFVTGNLT++AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWE FEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

A0A1S3C8H3 uncharacterized protein LOC1034976901.3e-8985.71Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATI  FQ  +SLQTSL  IRPN  L+IC I C+G+NP TDSP  +ESKPENAVLKVAWYGSELLGIAASFLRPP+DV+TPVRAQELT DVSGAI RP+I
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIK+DF RSYFVTGNLT+EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

A0A5D3BY85 Nuclear transport factor 2 family protein1.3e-8985.71Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATI  FQ  +SLQTSL  IRPN  L+IC I C+G+NP TDSP  +ESKPENAVLKVAWYGSELLGIAASFLRPP+DV+TPVRAQELT DVSGAI RP+I
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIK+DF RSYFVTGNLT+EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

A0A6J1H5M4 uncharacterized protein LOC1114602603.1e-10296.83Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSLQTSLN IRPNRPLKIC IRCQG+NPAT SPK RESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQEL RDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

A0A6J1KYC4 uncharacterized protein LOC1114993121.6e-10397.88Show/hide
Query:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
        MATIFPFQSRTSL+TSLN IRPNRPLKICTIRCQGDNPATDSPK RESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI
Subjt:  MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVI

Query:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKW DFEDKGIGHWKFSCILSFPWRPILS
Subjt:  VETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46100.1 Nuclear transport factor 2 (NTF2) family protein2.0e-6161.63Show/hide
Query:  NVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGN
        ++ R NR  +   + C+G NP  +    +  +P+N +LK+AWYGSELLGIAAS  R P +    V   E+  D SG   R  +V++IK+DF+RSYFVTGN
Subjt:  NVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGN

Query:  LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS
        LT E YEE+CEFADPAGSFKGL+RFKRNCTNFGSL++KSNMKL KWE+FEDKGIGHWKFSC++SFPW+PILS
Subjt:  LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILS

AT2G46100.2 Nuclear transport factor 2 (NTF2) family protein1.1e-4658Show/hide
Query:  NVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGN
        ++ R NR  +   + C+G NP  +    +  +P+N +LK+AWYGSELLGIAAS  R P +    V   E+  D SG   R  +V++IK+DF+RSYFVTGN
Subjt:  NVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFERSYFVTGN

Query:  LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFE
        LT E YEE+CEFADPAGSFKGL+RFKRNCTNFGSL++KSNMKL KWE+FE
Subjt:  LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFE

AT3G04890.1 Uncharacterized conserved protein (DUF2358)4.7e-1030.85Show/hide
Query:  IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKG----IGHWKFSCILSFPWRPILS
        ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++L   E  E       +  WK    L  PWRP++S
Subjt:  IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKG----IGHWKFSCILSFPWRPILS

AT3G04890.2 Uncharacterized conserved protein (DUF2358)4.7e-1030.85Show/hide
Query:  IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKG----IGHWKFSCILSFPWRPILS
        ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++L   E  E       +  WK    L  PWRP++S
Subjt:  IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKG----IGHWKFSCILSFPWRPILS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGATTTTCCCTTTTCAATCTCGTACATCTCTTCAAACATCTCTCAACGTCATTCGACCTAATCGCCCTCTCAAGATCTGCACAATCCGGTGTCAAGGGGACAA
TCCCGCTACCGATTCGCCGAAGAAGCGAGAATCTAAGCCCGAGAATGCGGTGCTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTC
CGCCGACGGATGTTGAAACGCCTGTTAGGGCTCAAGAGCTCACGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGG
TCATACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTAC
AAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTT
GGAGACCAATTCTATCTGGTATGTTTAATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATTTTCAGCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCGAACCATCCATGTTTGTAAATTGCAATGGCGACGATT
TTCCCTTTTCAATCTCGTACATCTCTTCAAACATCTCTCAACGTCATTCGACCTAATCGCCCTCTCAAGATCTGCACAATCCGGTGTCAAGGGGACAATCCCGCTACCGA
TTCGCCGAAGAAGCGAGAATCTAAGCCCGAGAATGCGGTGCTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATG
TTGAAACGCCTGTTAGGGCTCAAGAGCTCACGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCATACTTCGTC
ACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATC
CCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTC
TATCTGGTATGTTTAATTTATGA
Protein sequenceShow/hide protein sequence
MATIFPFQSRTSLQTSLNVIRPNRPLKICTIRCQGDNPATDSPKKRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQELTRDVSGAIRRPVIVETIKKDFER
SYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSGMFNL