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Carg28021 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28021
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr05:6678598..6682108
RNA-Seq ExpressionCarg28021
SyntenyCarg28021
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599005.1 hypothetical protein SDJN03_08783, partial [Cucurbita argyrosperma subsp. sororia]4.9e-2291.53Show/hide
Query:  SFCRNRTPASHPRVLPQPHQCRLPSFAAVRRRGPLQSSPTLSIFFQSLAVEVFWVGPTP
        S  + RTPASHPRVLPQPHQCRLPSFAAVRRRGPL SSPTLSIFFQSLAVEVFWVGPTP
Subjt:  SFCRNRTPASHPRVLPQPHQCRLPSFAAVRRRGPLQSSPTLSIFFQSLAVEVFWVGPTP
KAG7029972.1 hypothetical protein SDJN02_08316, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-58100Show/hide
Query:  RTPAPLTVPFSFFLHSLSAAAVSCWLSSIPPLPPPGSFPSSLPISFCRNRTPASHPRVLPQPHQCRLPSFAAVRRRGPLQSSPTLSIFFQSLAVEVFWVG
        RTPAPLTVPFSFFLHSLSAAAVSCWLSSIPPLPPPGSFPSSLPISFCRNRTPASHPRVLPQPHQCRLPSFAAVRRRGPLQSSPTLSIFFQSLAVEVFWVG
Subjt:  RTPAPLTVPFSFFLHSLSAAAVSCWLSSIPPLPPPGSFPSSLPISFCRNRTPASHPRVLPQPHQCRLPSFAAVRRRGPLQSSPTLSIFFQSLAVEVFWVG

Query:  PTPGEVVFHKGF
        PTPGEVVFHKGF
Subjt:  PTPGEVVFHKGF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAACGCCGGCACCCCTCACTGTCCCATTCAGTTTCTTTCTTCACTCCCTCTCTGCTGCAGCCGTAAGCTGCTGGCTGTCCAGCATCCCTCCACTGCCCCCACCGGGTTC
TTTTCCTTCTTCTCTTCCTATCTCTTTCTGCCGCAACCGCACGCCGGCGAGTCACCCTCGTGTTCTGCCGCAGCCGCACCAGTGTCGACTACCTTCTTTTGCAGCTGTCC
GTCGCCGTGGTCCACTCCAGTCTTCCCCCACACTTTCCATCTTCTTCCAGTCGCTCGCCGTCGAGGTCTTTTGGGTTGGACCAACTCCGGGTGAGGTTGTGTTTCATAAA
GGATTTTGA
mRNA sequenceShow/hide mRNA sequence
CGAACGCCGGCACCCCTCACTGTCCCATTCAGTTTCTTTCTTCACTCCCTCTCTGCTGCAGCCGTAAGCTGCTGGCTGTCCAGCATCCCTCCACTGCCCCCACCGGGTTC
TTTTCCTTCTTCTCTTCCTATCTCTTTCTGCCGCAACCGCACGCCGGCGAGTCACCCTCGTGTTCTGCCGCAGCCGCACCAGTGTCGACTACCTTCTTTTGCAGCTGTCC
GTCGCCGTGGTCCACTCCAGTCTTCCCCCACACTTTCCATCTTCTTCCAGTCGCTCGCCGTCGAGGTCTTTTGGGTTGGACCAACTCCGGGTGAGGTTGTGTTTCATAAA
GGATTTTGA
Protein sequenceShow/hide protein sequence
RTPAPLTVPFSFFLHSLSAAAVSCWLSSIPPLPPPGSFPSSLPISFCRNRTPASHPRVLPQPHQCRLPSFAAVRRRGPLQSSPTLSIFFQSLAVEVFWVGPTPGEVVFHK
GF