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Carg28033 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28033
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionO-fucosyltransferase family protein
Genome locationCarg_Chr03:1829584..1832529
RNA-Seq ExpressionCarg28033
SyntenyCarg28033
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603306.1 hypothetical protein SDJN03_03915, partial [Cucurbita argyrosperma subsp. sororia]4.8e-5076.6Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

KAG7033578.1 hypothetical protein SDJN02_03302, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-86100Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAE
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAE
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAE

Query:  NLRDASEKVFFETILVFLRIMTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE
        NLRDASEKVFFETILVFLRIMTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE
Subjt:  NLRDASEKVFFETILVFLRIMTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE

KAG7033584.1 hypothetical protein SDJN02_03308 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-5076.6Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

XP_022932889.1 uncharacterized protein LOC111439414 isoform X1 [Cucurbita moschata]4.8e-5076.6Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

XP_022932890.1 uncharacterized protein LOC111439414 isoform X2 [Cucurbita moschata]4.8e-5076.6Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

TrEMBL top hitse value%identityAlignment
A0A5D3DWC1 O-fucosyltransferase family protein9.4e-4467.38Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKG+LH STNASSEE WE NSCAMDSLYDMDLISDTVPVILDNSK WYQV ST MKLG+R VAHV+Q                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSA++LPYKFLPSMAAENLRDA+EK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

A0A6J1EY95 uncharacterized protein LOC111439414 isoform X12.3e-5076.6Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

A0A6J1F3E8 O-fucosyltransferase family protein2.3e-5076.6Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

A0A6J1HRU4 O-fucosyltransferase family protein2.0e-4975.89Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILH STNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

A0A6J1HW65 O-fucosyltransferase family protein2.0e-4975.89Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------
        MPSRMCINPIHNKKGILH STNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ                     
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQ---------------------

Query:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV
                   DRNNRSAILLPYKFLPSMAAENLRDASEK+
Subjt:  -----------DRNNRSAILLPYKFLPSMAAENLRDASEKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41150.1 unknown protein1.1e-3150.35Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHV-----------------------
        MPSRMCINPIHNKKGIL+ S N + EE WE +SCAM+SLYD+DLIS+ +PVILD+S+ W+ + ST MKL  R  AHV                       
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHV-----------------------

Query:  ---------DQDRNNRSAILLPYKFLPSMAAENLRDASEKV
                  +DR NRS ++LPY FL +MAA  LRDA+EKV
Subjt:  ---------DQDRNNRSAILLPYKFLPSMAAENLRDASEKV

AT2G41150.2 unknown protein1.4e-3149.65Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHV-----------------------
        MPSRMCINPIHNKKGIL+ S N + EE WE +SCAM+SLYD+DLIS+ +PVILD+S+ W+ + ST MKL  R  AHV                       
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHV-----------------------

Query:  ---------DQDRNNRSAILLPYKFLPSMAAENLRDASEKV
                  +DR NRS ++LPY FL +MAA  LRDA+EK+
Subjt:  ---------DQDRNNRSAILLPYKFLPSMAAENLRDASEKV

AT3G56750.1 unknown protein6.7e-3452.14Show/hide
Query:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVD----------------------
        MPS MCINPIHNKKGIL+ S N ++EE W  +SCAMDSLYD+DLIS+ +PVILD+SK W+ V ST MKLG R +AHV                       
Subjt:  MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVD----------------------

Query:  ---------QDRNNRSAILLPYKFLPSMAAENLRDASEKV
                 +DR+NRSA++LPY FLP+MAA  LR+A+EK+
Subjt:  ---------QDRNNRSAILLPYKFLPSMAAENLRDASEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGA
TTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGG
TTGCCCATGTTGATCAAGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTT
TTTGAAACCATATTAGTCTTCCTACGAATCATGACAATAACGGAGAGCCTATCGCTGGTGATCGAGAGGCTATTGGCGGGTGCCAAATACGATCATCAGAACGTTCAAAG
AAGACGATTACAGATCTTAGCCTTCACCGATGACCCAAAGAGAAGTCACGAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTCTAGAATGTGTATCAACCCTATACACAATAAGAAAGGGATTCTTCATCACTCCACCAATGCAAGCTCAGAGGAAAGATGGGAAACAAACTCTTGTGCCATGGA
TTCGTTGTACGATATGGATCTTATATCTGATACCGTACCGGTGATTTTAGACAACTCAAAATTATGGTATCAGGTGCAGTCAACTGGTATGAAATTAGGATCTAGAGTGG
TTGCCCATGTTGATCAAGACAGAAACAACCGCAGTGCCATATTGTTGCCCTATAAATTTCTTCCTTCTATGGCAGCAGAAAACTTGAGGGATGCATCTGAGAAGGTATTT
TTTGAAACCATATTAGTCTTCCTACGAATCATGACAATAACGGAGAGCCTATCGCTGGTGATCGAGAGGCTATTGGCGGGTGCCAAATACGATCATCAGAACGTTCAAAG
AAGACGATTACAGATCTTAGCCTTCACCGATGACCCAAAGAGAAGTCACGAA
Protein sequenceShow/hide protein sequence
MPSRMCINPIHNKKGILHHSTNASSEERWETNSCAMDSLYDMDLISDTVPVILDNSKLWYQVQSTGMKLGSRVVAHVDQDRNNRSAILLPYKFLPSMAAENLRDASEKVF
FETILVFLRIMTITESLSLVIERLLAGAKYDHQNVQRRRLQILAFTDDPKRSHE