; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28043 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28043
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L26
Genome locationCarg_Chr13:3694779..3695219
RNA-Seq ExpressionCarg28043
SyntenyCarg28043
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]1.4e-6997.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_010102767.1 60S ribosomal protein L26-1 [Morus notabilis]1.8e-6995.89Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVLMSAPLSGDLRSKYNVRSMP+RKDDEVQV+RGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVVITKL+LDKDRKSLLDRKAKGRA+ADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]1.1e-6995.89Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]4.4e-71100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]1.8e-6995.89Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIER+TREKVNGSTVNVG+NP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A1S3C7Q4 60S ribosomal protein L26-1-like6.8e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like6.8e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like5.2e-7095.89Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRK+RKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1EUH8 60S ribosomal protein L26-1-like2.1e-71100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1ICB8 60S ribosomal protein L26-1-like2.1e-71100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-12.8e-6585.62Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHF+A SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVVITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L263.6e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF+APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKVVIT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

Q39411 60S ribosomal protein L268.0e-6080Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR++RK HF+A SS RRV MS+PLS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK +IHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV
        +KVVITKL+LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-27.0e-6483.56Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHF+APSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S V+ITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

Q9UNX3 60S ribosomal protein L26-like 13.6e-4470.15Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF+APS VRR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLKLDKDRKSLLDRKAKGRASADKDKG
        PSKVVIT+LKLDKDRK +L+RKAK R    K+KG
Subjt:  PSKVVITKLKLDKDRKSLLDRKAKGRASADKDKG

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein2.0e-6685.62Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHF+A SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVVITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein5.0e-6583.56Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHF+APSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S V+ITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAGTCGCAAGGCTCACTTCTCAGCGCCGTCGAGCGTCCGGCGGGTTCTTATGAGTGCTCCCCTCTCCGGAGA
TCTGCGCTCCAAGTACAATGTCCGCTCTATGCCGATTCGCAAGGACGATGAAGTTCAGGTCTTGAGAGGAACCTACAAGGGCCGCGAAGGTAAGGTCGTACAGGTCTACC
GTCGCAAGTGGATCATTCACATCGAACGCATCACCAGAGAGAAGGTTAACGGCTCTACCGTTAACGTCGGAATCAATCCGTCCAAGGTTGTGATCACAAAGCTCAAGTTG
GACAAGGACAGGAAGTCTCTTCTCGATCGTAAGGCTAAGGGCCGTGCTTCTGCAGATAAGGATAAGGGCACTAAATTCACCGCTGAGGATATTATGCAAAGTGTCGACTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAGTCGCAAGGCTCACTTCTCAGCGCCGTCGAGCGTCCGGCGGGTTCTTATGAGTGCTCCCCTCTCCGGAGA
TCTGCGCTCCAAGTACAATGTCCGCTCTATGCCGATTCGCAAGGACGATGAAGTTCAGGTCTTGAGAGGAACCTACAAGGGCCGCGAAGGTAAGGTCGTACAGGTCTACC
GTCGCAAGTGGATCATTCACATCGAACGCATCACCAGAGAGAAGGTTAACGGCTCTACCGTTAACGTCGGAATCAATCCGTCCAAGGTTGTGATCACAAAGCTCAAGTTG
GACAAGGACAGGAAGTCTCTTCTCGATCGTAAGGCTAAGGGCCGTGCTTCTGCAGATAAGGATAAGGGCACTAAATTCACCGCTGAGGATATTATGCAAAGTGTCGACTA
A
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINPSKVVITKLKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD