; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28049 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28049
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontobamovirus multiplication protein 2B isoform X1
Genome locationCarg_Chr19:5172007..5173857
RNA-Seq ExpressionCarg28049
SyntenyCarg28049
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011526.1 Tobamovirus multiplication protein 2B, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-87100Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

XP_022952816.1 tobamovirus multiplication protein 2B isoform X1 [Cucurbita moschata]1.7e-5674.87Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATASASGRSNRDGTAK MVADHISQSVRSTSNLLHLMQQSSSA                                             QLSLSYSSSCL
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

XP_022972006.1 tobamovirus multiplication protein 2B isoform X1 [Cucurbita maxima]2.1e-5473.12Show/hide
Query:  ATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQ
        A+ASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSA                                             Q SLSYSSSCLQ
Subjt:  ATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQ

Query:  AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDA+VEKGLESIPHLQTVVQLLTNME TQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

XP_023553906.1 tobamovirus multiplication protein 2B isoform X1 [Cucurbita pepo subsp. pepo]2.7e-5775.94Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSA                                             QLSLSYSSSCL
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

XP_023553907.1 tobamovirus multiplication protein 2B isoform X2 [Cucurbita pepo subsp. pepo]2.4e-5070.05Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSA                                                        
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

TrEMBL top hitse value%identityAlignment
A0A5A7TAF2 Peroxidase3.9e-4666.31Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATAS SGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQA SLSL                                                 
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
         AQL KLPKNLLAKAST++NT KILEQMPQVVSSLDAYVEKGLESIP LQTVVQLLTNMES+QLKSLSQ QHP+EE ES+HQ KDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

A0A6J1GL95 tobamovirus multiplication protein 2B isoform X18.4e-5774.87Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATASASGRSNRDGTAK MVADHISQSVRSTSNLLHLMQQSSSA                                             QLSLSYSSSCL
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

A0A6J1GLF5 tobamovirus multiplication protein 2B isoform X27.7e-5068.98Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL
        MATASASGRSNRDGTAK MVADHISQSVRSTSNLLHLMQQSSSA                                                        
Subjt:  MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCL

Query:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  QAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

A0A6J1I3H0 tobamovirus multiplication protein 2B isoform X24.2e-4867.74Show/hide
Query:  ATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQ
        A+ASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSA                                                        Q
Subjt:  ATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQ

Query:  AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDA+VEKGLESIPHLQTVVQLLTNME TQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

A0A6J1I4S0 tobamovirus multiplication protein 2B isoform X11.0e-5473.12Show/hide
Query:  ATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQ
        A+ASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSA                                             Q SLSYSSSCLQ
Subjt:  ATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQ

Query:  AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD
        AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDA+VEKGLESIPHLQTVVQLLTNME TQLKSLSQIQHPKEEIES+HQLKDVD
Subjt:  AQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD

SwissProt top hitse value%identityAlignment
Q8H960 Tobamovirus multiplication protein 2B1.1e-2146.2Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS
        MATAS + R  S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+                                                      
Subjt:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS

Query:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ
          QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV QLL NMESTQL++L Q
Subjt:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ

Arabidopsis top hitse value%identityAlignment
AT1G32370.1 tobamovirus multiplication 2B7.9e-2346.2Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS
        MATAS + R  S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+                                                      
Subjt:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS

Query:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ
          QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV QLL NMESTQL++L Q
Subjt:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ

AT1G32370.2 tobamovirus multiplication 2B7.9e-2346.2Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS
        MATAS + R  S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+                                                      
Subjt:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS

Query:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ
          QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV QLL NMESTQL++L Q
Subjt:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ

AT1G32370.3 tobamovirus multiplication 2B7.9e-2346.2Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS
        MATAS + R  S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+                                                      
Subjt:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS

Query:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ
          QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV QLL NMESTQL++L Q
Subjt:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ

AT1G32370.4 tobamovirus multiplication 2B7.9e-2346.2Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS
        MATAS + R  S  D TAKA+VAD ISQ+V ST+NLLHLM+QSSS+                                                      
Subjt:  MATASASGR--SNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSS

Query:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ
          QAQLAKLPKNLLAKAS  K T + L Q+PQV+SSLDA++E GL S  HL TV QLL NMESTQL++L Q
Subjt:  CLQAQLAKLPKNLLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGCTTCCGCATCAGGTCGAAGCAACAGAGACGGTACGGCCAAAGCCATGGTGGCCGACCACATTTCTCAGTCAGTGCGATCCACTTCCAATCTCCTTCATCT
GATGCAGCAATCTTCTTCGGCTCAGGCATGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTGTGTTTTCTGAAGCTTTACGAGTTCATTCGA
ACGGCACTCTTAGGAGTAGGATCGTTTCTTACGTTTTGCGTTGTTTTCAGTTGAGTTTGTCATATAGTTCATCTTGCCTGCAGGCTCAGTTAGCAAAATTGCCAAAGAAC
CTTTTGGCGAAAGCATCAACTATAAAAAATACTGAGAAAATCTTAGAGCAGATGCCCCAAGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGCATTCC
TCATTTGCAGACTGTTGTGCAATTACTTACAAACATGGAAAGCACCCAACTAAAATCTCTCTCCCAAATCCAACACCCTAAAGAGGAAATCGAGTCTGTTCATCAACTGA
AAGATGTGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCGCTTCCGCATCAGGTCGAAGCAACAGAGACGGTACGGCCAAAGCCATGGTGGCCGACCACATTTCTCAGTCAGTGCGATCCACTTCCAATCTCCTTCATCT
GATGCAGCAATCTTCTTCGGCTCAGGCATGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTGTGTTTTCTGAAGCTTTACGAGTTCATTCGA
ACGGCACTCTTAGGAGTAGGATCGTTTCTTACGTTTTGCGTTGTTTTCAGTTGAGTTTGTCATATAGTTCATCTTGCCTGCAGGCTCAGTTAGCAAAATTGCCAAAGAAC
CTTTTGGCGAAAGCATCAACTATAAAAAATACTGAGAAAATCTTAGAGCAGATGCCCCAAGTGGTTTCATCATTAGATGCATATGTTGAGAAGGGACTAGAAAGCATTCC
TCATTTGCAGACTGTTGTGCAATTACTTACAAACATGGAAAGCACCCAACTAAAATCTCTCTCCCAAATCCAACACCCTAAAGAGGAAATCGAGTCTGTTCATCAACTGA
AAGATGTGGACTAA
Protein sequenceShow/hide protein sequence
MATASASGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQACSLSLSLSLSLSLSLSFVFSEALRVHSNGTLRSRIVSYVLRCFQLSLSYSSSCLQAQLAKLPKN
LLAKASTIKNTEKILEQMPQVVSSLDAYVEKGLESIPHLQTVVQLLTNMESTQLKSLSQIQHPKEEIESVHQLKDVD