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Carg28052 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28052
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:10284031..10284369
RNA-Seq ExpressionCarg28052
SyntenyCarg28052
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588838.1 hypothetical protein SDJN03_17403, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4996.43Show/hide
Query:  MNPNSLSFPLRSLKFPDAKRVGLFELDRIESIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSSSFFVARPRSFLPLLQPLTVWLRLRATVVFA
        MNPNSLSFPLRSLKFPDAKRVGLFELDRI SIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSS FFVARPRSFLPLLQPLTV LRL ATVVFA
Subjt:  MNPNSLSFPLRSLKFPDAKRVGLFELDRIESIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSSSFFVARPRSFLPLLQPLTVWLRLRATVVFA

Query:  SLWPRVSPRRAP
        SLWPRVSPRRAP
Subjt:  SLWPRVSPRRAP
KAG7022594.1 hypothetical protein SDJN02_16328, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-53100Show/hide
Query:  MNPNSLSFPLRSLKFPDAKRVGLFELDRIESIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSSSFFVARPRSFLPLLQPLTVWLRLRATVVFA
        MNPNSLSFPLRSLKFPDAKRVGLFELDRIESIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSSSFFVARPRSFLPLLQPLTVWLRLRATVVFA
Subjt:  MNPNSLSFPLRSLKFPDAKRVGLFELDRIESIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSSSFFVARPRSFLPLLQPLTVWLRLRATVVFA

Query:  SLWPRVSPRRAP
        SLWPRVSPRRAP
Subjt:  SLWPRVSPRRAP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCTAATTCATTATCCTTTCCCCTTCGTTCCCTGAAATTCCCGGATGCCAAACGGGTCGGGTTATTCGAGTTGGATCGAATCGAGTCGATAGCGCGGGCCGGGTC
GGCTTCTTCCTTCTTCTCCTTCCTCCCCGCGACGGTCTTCTCCTTCTTTGTTCTTCGTGGTTGCAGAAACGGCGATTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTTTCG
TCGCTCGCCCACGTTCCTTCCTTCCTCTGCTTCAGCCTCTGACCGTCTGGCTTCGTCTACGAGCAACAGTCGTCTTCGCCAGCTTGTGGCCTCGAGTTTCTCCTCGGCGA
GCACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCCTAATTCATTATCCTTTCCCCTTCGTTCCCTGAAATTCCCGGATGCCAAACGGGTCGGGTTATTCGAGTTGGATCGAATCGAGTCGATAGCGCGGGCCGGGTC
GGCTTCTTCCTTCTTCTCCTTCCTCCCCGCGACGGTCTTCTCCTTCTTTGTTCTTCGTGGTTGCAGAAACGGCGATTCCTCCTCCTCCTCCTCTTCTTCTTCTTTTTTCG
TCGCTCGCCCACGTTCCTTCCTTCCTCTGCTTCAGCCTCTGACCGTCTGGCTTCGTCTACGAGCAACAGTCGTCTTCGCCAGCTTGTGGCCTCGAGTTTCTCCTCGGCGA
GCACCGTGA
Protein sequenceShow/hide protein sequence
MNPNSLSFPLRSLKFPDAKRVGLFELDRIESIARAGSASSFFSFLPATVFSFFVLRGCRNGDSSSSSSSSSFFVARPRSFLPLLQPLTVWLRLRATVVFASLWPRVSPRR
AP