; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg28055 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28055
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNascent polypeptide-associated complex subunit alpha, muscle-specific form
Genome locationCarg_Chr02:9946068..9946667
RNA-Seq ExpressionCarg28055
SyntenyCarg28055
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571464.1 hypothetical protein SDJN03_28192, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7776.21Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAV+VVE QHRNQYYG       A F S PSRDFRG+NCRSFQSGAGILPTP KA  S T+H YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N NS LHEEFYD +FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT S E+PRSAPEF++H PSAKSAPPSPTR+   S RF FH+ DSATKTLRRIL+
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

KAG6606421.1 hypothetical protein SDJN03_03738, partial [Cucurbita argyrosperma subsp. sororia]1.9e-109100Show/hide
Query:  MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVL
        MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVL
Subjt:  MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVL

Query:  HEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE
        HEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE
Subjt:  HEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE

KAG7011227.1 hypothetical protein SDJN02_26130, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-6675.27Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAV+VVE QHRNQYYG       A F S PSRDFRG+NCRSFQSGAGILPTP KA  S T+H YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPR
         N NS LHEEFYD +FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT S E+PRSAPEF++H PSAKSAPPSPTR+   S R
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPR

KGN47907.1 hypothetical protein Csa_004001 [Cucumis sativus]7.7e-7977.67Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDFRG+NCRSFQSGAGILPTP KA  SETEHFYP SPKTP  CL+SNS N K  AT+ +APIPIKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N ++  HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQNFS RFFFH+ DSATKTLRRIL+
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDV NE
Subjt:  LDVDNE

XP_016900729.1 PREDICTED: uncharacterized protein LOC107990294 [Cucumis melo]5.6e-7776.7Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSETEHFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N ++V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQ+FS R+FFH+ DSATKTLRRIL+
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP6 Uncharacterized protein3.7e-7977.67Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDFRG+NCRSFQSGAGILPTP KA  SETEHFYP SPKTP  CL+SNS N K  AT+ +APIPIKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N ++  HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQNFS RFFFH+ DSATKTLRRIL+
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDV NE
Subjt:  LDVDNE

A0A1S4DXL6 uncharacterized protein LOC1079902942.7e-7776.7Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSETEHFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH
         N ++V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF++HHPSAKSAPPSPTRDQ+FS R+FFH+ DSATKTLRRIL+
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILH

Query:  LDVDNE
        LDVDNE
Subjt:  LDVDNE

A0A5A7UUU2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form1.1e-5774.85Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSETEHFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK
         N ++V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF++HHPSAK
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK

A0A5D3CPQ8 Nascent polypeptide-associated complex subunit alpha, muscle-specific form1.1e-5774.85Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF
        MEAVVV+E QHRNQYY        A FGS  SRDF G+NCRSFQSGAGILPTP KA TSETEHFYP SPKTP   L+SNS N K  AT  +API IKPK 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKF

Query:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK
         N ++V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS E+ RSAPEF++HHPSAK
Subjt:  LNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAK

A0A5N6QRS4 Uncharacterized protein3.5e-4558.37Show/hide
Query:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKA-STSETEH-FY-PSS--PKTPLTCLSSNSGNAKSGATVPTAPIP
        ME +VV   QHRNQYY          FGS PSRDF G+NCRS+QSGAGILPTP KA STS T   FY PSS  P TP    S +  ++K+  TV +API 
Subjt:  MEAVVVVEQQHRNQYYG-------APFGSFPSRDFRGVNCRSFQSGAGILPTPSKA-STSETEH-FY-PSS--PKTPLTCLSSNSGNAKSGATVPTAPIP

Query:  IKPKFLNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPE-FDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATK
        I  K         E+  +   SFSELWAGPTYSNSPPPSSLPIPKFS+  KRT S ++PRS PE    HHP AKSAPPSPTR+   S R  F   DSATK
Subjt:  IKPKFLNNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPE-FDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATK

Query:  TLRRILHLD
        TLRRIL+LD
Subjt:  TLRRILHLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02715.1 unknown protein5.1e-2843.27Show/hide
Query:  VVVEQQHRNQYYGAP------FGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSE------TEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPK
        ++V  +HR+QYYG        F S PS+ FR +NCR+FQSG G+LP P + S++       ++   P SPK+ L      S    SG    T+PIPI   
Subjt:  VVVEQQHRNQYYGAP------FGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSE------TEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPK

Query:  FLNNNSVLHEEFYDP--SFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLR
          +       EF D   S S+SELWAGPTYSNSPPP+S+PIPKFS+  KRT S   P      D+    AKSAP SPT   + +P   F +  SAT TLR
Subjt:  FLNNNSVLHEEFYDP--SFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLR

Query:  RILHLDVD
        R+L+L+++
Subjt:  RILHLDVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAGTGGTCGTTGTTGAGCAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAACTGTAGGAGTTTCCA
ATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTGAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCG
GAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACAGTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCG
TTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTACCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCG
TTCTGCCCCTGAATTTGATTTGCATCACCCATCTGCCAAGTCTGCACCACCATCCCCAACTCGAGACCAAAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTG
CGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAGTGGTCGTTGTTGAGCAGCAGCATAGGAACCAATATTATGGTGCTCCATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAACTGTAGGAGTTTCCA
ATCTGGAGCTGGTATACTCCCAACTCCCTCCAAGGCTTCTACCTCTGAAACTGAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCAACTCCG
GAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAACAGTGTTCTCCATGAAGAATTCTATGATCCAAGTTTCTCG
TTCTCTGAGCTTTGGGCTGGACCCACTTATTCAAATTCTCCGCCTCCAAGTTCGTTACCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCAGGAGATCCCTCG
TTCTGCCCCTGAATTTGATTTGCATCACCCATCTGCCAAGTCTGCACCACCATCCCCAACTCGAGACCAAAACTTTTCCCCCAGATTTTTCTTTCATAATGATGACTCTG
CGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGA
Protein sequenceShow/hide protein sequence
MEAVVVVEQQHRNQYYGAPFGSFPSRDFRGVNCRSFQSGAGILPTPSKASTSETEHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNNSVLHEEFYDPSFS
FSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSQEIPRSAPEFDLHHPSAKSAPPSPTRDQNFSPRFFFHNDDSATKTLRRILHLDVDNE