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Carg28062 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg28062
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiongamma aminobutyrate transaminase 2-like
Genome locationCarg_Chr09:3581540..3586215
RNA-Seq ExpressionCarg28062
SyntenyCarg28062
Gene Ontology termsGO:0009102 - biotin biosynthetic process (biological process)
GO:0009448 - gamma-aminobutyric acid metabolic process (biological process)
GO:0003867 - 4-aminobutyrate transaminase activity (molecular function)
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024678.1 hypothetical protein SDJN02_13496, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-40100Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQGNQKYYTLQTDLNYNMLSNNLMNTATQ
        MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQGNQKYYTLQTDLNYNMLSNNLMNTATQ
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQGNQKYYTLQTDLNYNMLSNNLMNTATQ

XP_022136651.1 gamma aminobutyrate transaminase 3, chloroplastic-like [Momordica charantia]4.4e-1880.65Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLR+IIK KLGS AKDVAAFRTS ERL Q+QLL+QPYGTEAS +R+N TTDSRNG+G
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

XP_022936192.1 gamma aminobutyrate transaminase 2-like [Cucurbita moschata]2.2e-25100Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

XP_022976758.1 gamma aminobutyrate transaminase 2-like [Cucurbita maxima]2.2e-25100Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

XP_023523695.1 gamma aminobutyrate transaminase 3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]1.6e-1574.19Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLRTIIK K+GSSAKD +A R S ERL Q+Q L+ PYGTEASL+RDN +T SRNGQG
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

TrEMBL top hitse value%identityAlignment
A0A1S3CM58 LOW QUALITY PROTEIN: gamma aminobutyrate transaminase 2-like1.7e-1270.97Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLER-DNWTTDSRNGQ
        MGFN LLR I   KLGS AKDVAAFRTS ERL Q+QLL+Q Y TEASL+R DN T D+R+GQ
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLER-DNWTTDSRNGQ

A0A6J1C439 gamma aminobutyrate transaminase 3, chloroplastic-like2.1e-1880.65Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLR+IIK KLGS AKDVAAFRTS ERL Q+QLL+QPYGTEAS +R+N TTDSRNG+G
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

A0A6J1F7R7 gamma aminobutyrate transaminase 2-like1.1e-25100Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

A0A6J1FIM2 gamma aminobutyrate transaminase 3, chloroplastic-like3.8e-1572.58Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLRTIIK K+GS AKD +A R S ERL Q+Q L+ PYGTEASL+RDN +T SRNGQG
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

A0A6J1IN43 gamma aminobutyrate transaminase 2-like1.1e-25100Show/hide
Query:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
        MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG
Subjt:  MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCAACCATTTGCTTCGTACGATTATCAAACACAAGCTTGGTTCATCTGCAAAAGATGTTGCTGCTTTTAGAACTTCTAGTGAGCGGCTCGCTCAGATTCAATT
ACTTACCCAACCGTATGGTACAGAAGCATCATTGGAAAGGGATAATTGGACTACTGATTCAAGAAATGGTCAAGGCAACCAAAAGTACTACACTTTACAGACAGATCTCA
ACTACAACATGTTGAGTAATAACTTGATGAACACAGCAACTCAA
mRNA sequenceShow/hide mRNA sequence
ACTCTACTCCTCTTCCTTTGCTTCTTATATCAGTTCTCCATTATTTTTTGCTTCACCTTGAACCAGAAGAAATGGGCTTCAACCATTTGCTTCGTACGATTATCAAACAC
AAGCTTGGTTCATCTGCAAAAGATGTTGCTGCTTTTAGAACTTCTAGTGAGCGGCTCGCTCAGATTCAATTACTTACCCAACCGTATGGTACAGAAGCATCATTGGAAAG
GGATAATTGGACTACTGATTCAAGAAATGGTCAAGGCAACCAAAAGTACTACACTTTACAGACAGATCTCAACTACAACATGTTGAGTAATAACTTGATGAACACAGCAA
CTCAA
Protein sequenceShow/hide protein sequence
MGFNHLLRTIIKHKLGSSAKDVAAFRTSSERLAQIQLLTQPYGTEASLERDNWTTDSRNGQGNQKYYTLQTDLNYNMLSNNLMNTATQ